RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 SNX27Q96L92 541 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 ZNF560Q96MR9 790 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 LACRTQ9GZZ8 138 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 RABEP2Q9H5N1 569 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 SLC38A7Q9NVC3 462 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 SNTG2Q9NY99 539 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 OGFRQ9NZT2 677 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 UVRAGQ9P2Y5 699 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 NOCTQ9UK39 431 aaKnown RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 PIN4Q9Y237 131 aaKnown RBP7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 PCDHB4Q9Y5E5 795 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 MRFAP1Q9Y605 127 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 CDY2AQ9Y6F7 541 aa7.11□□□□□ -1.27
FNDC3B-212ENST00000494000 TLR3O15455 904 aaKnown RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 CYP26A1O43174 497 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 GPC5P78333 572 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 PTGISQ16647 500 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 JADE1Q6IE81 842 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 GDF6Q6KF10 455 aaPredicted RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 GLYCTKQ8IVS8 523 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 EFCAB13Q8IY85 973 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 PLPP7Q8NBV4 271 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 MSANTD4Q8NCY6 345 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 LNX1Q8TBB1 728 aaPredicted RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 ZNF296Q8WUU4 475 aaPredicted RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 WDR24Q96S15 920 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 BCO2Q9BYV7 579 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 SENP6Q9GZR1 1112 aaPredicted RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 MIS12Q9H081 205 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 DPP3Q9NY33 737 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 XPO7Q9UIA9 1087 aaKnown RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 PHF24Q9UPV7 400 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 NOD1Q9Y239 953 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 SAR1BQ9Y6B6 198 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 PTPRJQ12913 1337 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 CITO14578 2027 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 EFCAB8A8MWE9 144 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 BHMG1C9JSJ3 638 aaPredicted RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 TOR1BO14657 336 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 CTIFO43310 598 aaKnown RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 ACO1P21399 889 aaKnown RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 PLA2G4AP47712 749 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 GALCP54803 685 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 MYL6P60660 151 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 MGAT3Q09327 533 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 TRIM32Q13049 653 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 SMAD4Q13485 552 aaKnown RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 LIN9Q5TKA1 542 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 ACAD10Q6JQN1 1059 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 ALKAL1Q6UXT8 129 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 TMEM110Q86TL2 294 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 PPHLN1Q8NEY8 458 aaKnown RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 CAGE1Q8TC20 777 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 ZBTB10Q96DT7 871 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 KIF12Q96FN5 646 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 ZNF668Q96K58 619 aaPredicted RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 NACA2Q9H009 215 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 SEPT11Q9NVA2 429 aaKnown RBP7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 GINS2Q9Y248 185 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 GIT1Q9Y2X7 761 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 HYOU1Q9Y4L1 999 aa7.1□□□□□ -1.27
FNDC3B-212ENST00000494000 FRMPD3Q5JV73 1810 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 MACROD2A1Z1Q3 448 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 RCCD1A6NED2 376 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 FOXD2O60548 495 aaPredicted RBP7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 ZNF623O75123 536 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 TCEA3O75764 348 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 SGPL1O95470 568 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 GNA15P30679 374 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 WNT7BP56706 349 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 OSTNP61366 133 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 TNNC1P63316 161 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 FMO1Q01740 532 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 ITIH3Q06033 890 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 HIC1Q14526 733 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 ZBTB6Q15916 424 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 CLEC16AQ2KHT3 1053 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 SEZ6Q53EL9 994 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 PLBD1Q6P4A8 553 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 C11orf74Q86VG3 221 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 FAM228AQ86W67 206 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 ARL6IP6Q8N6S5 226 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 C1orf127Q8N9H9 656 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 RBBP8NLQ8NC74 664 aaPredicted RBP7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 GIMAP1Q8WWP7 306 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 PPP1R16BQ96T49 567 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 SLC39A3Q9BRY0 314 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 PI4K2AQ9BTU6 479 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 XYLT2Q9H1B5 865 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 APOBEC3GQ9HC16 384 aaKnown RBP7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 PARP2Q9UGN5 583 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 SEPT3Q9UH03 358 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 PCDHGC3Q9UN70 934 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 ARHGEF37A1IGU5 675 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 DNM1LO00429 736 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 CST3P01034 146 aaPredicted RBP7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 FTLP02792 175 aaPredicted RBP7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 NFICP08651 508 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 KRT19P08727 400 aa7.09□□□□□ -1.27
FNDC3B-212ENST00000494000 TAP1Q03518 808 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms