RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 NPY5RQ15761 445 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 TRIM60Q495X7 471 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 VWA3BQ502W6 1294 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 SLC45A4Q5BKX6 768 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 RAP1GAP2Q684P5 730 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 FCRL6Q6DN72 434 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 TRMT10BQ6PF06 316 aaKnown RBP5.05□□□□□ -1.6
GTF3A-208ENST00000493903 ZDHHC24Q6UX98 284 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 LARP4Q71RC2 724 aaKnown RBP eCLIP5.05□□□□□ -1.6
GTF3A-208ENST00000493903 RAB11FIP2Q7L804 512 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 TMEM57Q8N5G2 664 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 USP38Q8NB14 1042 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 OR5M3Q8NGP4 307 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 ZCCHC14Q8WYQ9 949 aaKnown RBP5.05□□□□□ -1.6
GTF3A-208ENST00000493903 COG8Q96MW5 612 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 TRAPPC9Q96Q05 1148 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 LMAN2LQ9H0V9 348 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 OR10A2Q9H208 303 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 EPB41L4BQ9H329 900 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 TAF1DQ9H5J8 278 aaPredicted RBP5.05□□□□□ -1.6
GTF3A-208ENST00000493903 NOD2Q9HC29 1040 aa5.05□□□□□ -1.6
GTF3A-208ENST00000493903 EIF4G1Q04637 1599 aaKnown RBP5.04□□□□□ -1.6
GTF3A-208ENST00000493903 FSD2A1L4K1 749 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 PGPEP1LA6NFU8 196 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
GTF3A-208ENST00000493903 PCDH17O14917 1159 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 CNPP09543 421 aaKnown RBP5.04□□□□□ -1.6
GTF3A-208ENST00000493903 GYS1P13807 737 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 PECAM1P16284 738 aaPredicted RBP5.04□□□□□ -1.6
GTF3A-208ENST00000493903 MST1P26927 711 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 SLC6A4P31645 630 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 ATICP31939 592 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 CASRP41180 1078 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 CDK7P50613 346 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 ADCY7P51828 1080 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 BCAT1P54687 386 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 MLLT6P55198 1093 aaPredicted RBP5.04□□□□□ -1.6
GTF3A-208ENST00000493903 CASP6P55212 293 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 BPIFB4P59827 614 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 DUSP8Q13202 625 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 CCNG2Q16589 344 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 UBXN11Q5T124 520 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 KRT40Q6A162 431 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 ACAD10Q6JQN1 1059 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 ZNF529Q6P280 563 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 NFRKBQ6P4R8 1299 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 PPP1R32Q7Z5V6 425 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 GALNT5Q7Z7M9 940 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 ANKRD23Q86SG2 305 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 STK32CQ86UX6 486 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 ZDHHC14Q8IZN3 488 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 CMTM4Q8IZR5 234 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 OR1N1Q8NGS0 311 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 TDRD7Q8NHU6 1098 aaKnown RBP5.04□□□□□ -1.6
GTF3A-208ENST00000493903 SCAMP5Q8TAC9 235 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 FNIP1Q8TF40 1166 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 ST8SIA4Q92187 359 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 CEP95Q96GE4 821 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 TIGD1Q96MW7 591 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 MYOCQ99972 504 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 SYT3Q9BQG1 590 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 MESP1Q9BRJ9 268 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 CARD11Q9BXL7 1154 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 GPR63Q9BZJ6 419 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 PRKRIP1Q9H875 184 aaPredicted RBP5.04□□□□□ -1.6
GTF3A-208ENST00000493903 G6PC2Q9NQR9 355 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 NKIRAS2Q9NYR9 191 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 TMOD4Q9NZQ9 345 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 LPAR3Q9UBY5 353 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 NOL7Q9UMY1 257 aaKnown RBP5.04□□□□□ -1.6
GTF3A-208ENST00000493903 C19orf53Q9UNZ5 99 aaPredicted RBP5.04□□□□□ -1.6
GTF3A-208ENST00000493903 PCDHA5Q9Y5H7 936 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 ZMYM3Q14202 1370 aa5.04□□□□□ -1.6
GTF3A-208ENST00000493903 TDRD9Q8NDG6 1382 aaKnown RBP5.04□□□□□ -1.6
GTF3A-208ENST00000493903 A0A1W2PPH5 198 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 EFCAB8A8MWE9 144 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 B5MCH6 92 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 M0QYG6 137 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 DNPH1O43598 174 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 PLOD3O60568 738 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 USO1O60763 962 aaKnown RBP5.03□□□□□ -1.6
GTF3A-208ENST00000493903 USP1O94782 785 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 SASH1O94885 1247 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 RTN3O95197 1032 aaPredicted RBP5.03□□□□□ -1.6
GTF3A-208ENST00000493903 POMCP01189 267 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 C8AP07357 584 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 ANXA6P08133 673 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 ZSCAN22P10073 491 aaPredicted RBP5.03□□□□□ -1.6
GTF3A-208ENST00000493903 MYCLP12524 364 aaPredicted RBP5.03□□□□□ -1.6
GTF3A-208ENST00000493903 JUPP14923 745 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 FDXRP22570 491 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 IGFBP6P24592 240 aaPredicted RBP5.03□□□□□ -1.6
GTF3A-208ENST00000493903 IL13P35225 146 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 CLRN1P58418 232 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 SRSF3P84103 164 aaKnown RBP5.03□□□□□ -1.6
GTF3A-208ENST00000493903 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.03□□□□□ -1.6
GTF3A-208ENST00000493903 MRPL49Q13405 166 aaKnown RBP5.03□□□□□ -1.6
GTF3A-208ENST00000493903 ANKRD1Q15327 319 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 CRB2Q5IJ48 1285 aa5.03□□□□□ -1.6
GTF3A-208ENST00000493903 PRR31Q5SQ13 230 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms