RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 SLC25A11Q02978 314 aaKnown RBP10.14□□□□□ -0.79
NPHP3-209ENST00000493732 TMEM132DQ14C87 1099 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 ATP13A4Q4VNC1 1196 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 FAM47CQ5HY64 1035 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 RNASEH2BQ5TBB1 312 aaKnown RBP10.14□□□□□ -0.79
NPHP3-209ENST00000493732 EEF1DP3Q658K8 133 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 VSTM1Q6UX27 236 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 XYLT1Q86Y38 959 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 MAP7D3Q8IWC1 876 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 C1orf127Q8N9H9 656 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 CMASQ8NFW8 434 aaPredicted RBP10.14□□□□□ -0.79
NPHP3-209ENST00000493732 NLGN2Q8NFZ4 835 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 PPTC7Q8NI37 304 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 AFG1LQ8WV93 481 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 RSAD2Q8WXG1 361 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 MCRS1Q96EZ8 462 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 CDCA5Q96FF9 252 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 FRMD8Q9BZ67 464 aaPredicted RBP10.14□□□□□ -0.79
NPHP3-209ENST00000493732 OSBPL7Q9BZF2 842 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 PLEKHA5Q9HAU0 1116 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 IFT122Q9HBG6 1241 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 TXNRD2Q9NNW7 524 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 SIX4Q9UIU6 781 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 BARX2Q9UMQ3 279 aaPredicted RBP10.14□□□□□ -0.79
NPHP3-209ENST00000493732 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.14□□□□□ -0.79
NPHP3-209ENST00000493732 DERAQ9Y315 318 aa10.14□□□□□ -0.79
NPHP3-209ENST00000493732 RBM47A0AV96 593 aaKnown RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 FAM47DPA6NHR8 397 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 RASA4BC9J798 803 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 APOC4-APOC2K7ER74 178 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 GPR25O00155 361 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 B4GALT5O43286 388 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 RASA4O43374 803 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 SNX3O60493 162 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 PEX10O60683 326 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 DNAJC8O75937 253 aaPredicted RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 GJB6O95452 261 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 APOC2P02655 101 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ITGB3P05106 788 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 LGALS2P05162 132 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 PECAM1P16284 738 aaPredicted RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ARHGAP1Q07960 439 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 INCA1Q0VD86 236 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 PCBP1Q15365 356 aaKnown RBP eCLIP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 HIF1AQ16665 826 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 CCDC142Q17RM4 750 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 Q3C1V9 767 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 CCDC38Q502W7 563 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ZC3H12AQ5D1E8 599 aaKnown RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 CYP4A22Q5TCH4 519 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 JADE1Q6IE81 842 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 DPY19L2Q6NUT2 758 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ARMCX2Q7L311 632 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ZNF410Q86VK4 478 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 VSIG1Q86XK7 387 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 LINC01465Q8N7H1 131 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 SLC4A11Q8NBS3 891 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 KCTD6Q8NC69 237 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 GPRC5AQ8NFJ5 357 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 OPTNQ96CV9 577 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 HPDLQ96IR7 371 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 C9orf72Q96LT7 481 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ACAP3Q96P50 834 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ELAC2Q9BQ52 826 aaKnown RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 CNPY3Q9BT09 278 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 MAK16Q9BXY0 300 aaKnown RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 SSU72Q9NP77 194 aaKnown RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 KLHL11Q9NVR0 708 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 POLIQ9UNA4 740 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 AKT3Q9Y243 479 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 SLC45A1Q9Y2W3 748 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 USP15Q9Y4E8 981 aaPredicted RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 CFAP73A6NFT4 308 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 C3orf70A6NLC5 250 aaPredicted RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 MCF2LO15068 1137 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 PRPF4O43172 522 aaKnown RBP eCLIP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 CST8O60676 142 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 NFICP08651 508 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 SETSIPP0DME0 302 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 GBP2P32456 591 aaPredicted RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 SCTRP47872 440 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 IFNAR2P48551 515 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ZNF143P52747 638 aaPredicted RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 KLHL38Q2WGJ6 581 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 DCAF4L1Q3SXM0 396 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 CYP4F22Q6NT55 531 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 LCLAT1Q6UWP7 414 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 C4orf22Q6V702 233 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 TRPM8Q7Z2W7 1104 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 PDIK1LQ8N165 341 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ATP11CQ8NB49 1132 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 ACTL9Q8TC94 416 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 TRAPPC12Q8WVT3 735 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 MAML1Q92585 1016 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 CLMNQ96JQ2 1002 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 HEXIM2Q96MH2 286 aaKnown RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 SMC6Q96SB8 1091 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 NT5C1AQ9BXI3 368 aa10.13□□□□□ -0.79
NPHP3-209ENST00000493732 FHDC1Q9C0D6 1143 aaPredicted RBP10.13□□□□□ -0.79
NPHP3-209ENST00000493732 RNPEPQ9H4A4 650 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms