RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 TADA2AO75478 443 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 TOMM70O94826 608 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 POU4F1Q01851 419 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 HIST2H2ACQ16777 129 aaPredicted RBP20.91■□□□□ 0.94
RNF40-203ENST00000493683 GOLGA7BQ2TAP0 167 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 HIST2H2AA3Q6FI13 130 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 CD302Q8IX05 232 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 YAF2Q8IY57 180 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 CHST13Q8NET6 341 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 CASKIN2Q8WXE0 1202 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 EPS8L2Q9H6S3 715 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 NAGPAQ9UK23 515 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 NBPF26B4DH59 902 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 ASMTLO95671 621 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 RASA1P20936 1047 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 CTCFP49711 727 aaPredicted RBP20.91■□□□□ 0.94
RNF40-203ENST00000493683 LUZP2Q86TE4 346 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 NBPF15Q8N660 670 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 FAM71DQ8N9W8 422 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 JADE3Q92613 823 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 GPRASP2Q96D09 838 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 ADGRA3Q8IWK6 1321 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 KHDRBS2Q5VWX1 349 aaKnown RBP20.91■□□□□ 0.94
RNF40-203ENST00000493683 RSPH1Q8WYR4 309 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 ECSITQ9BQ95 431 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 SLC39A10Q9ULF5 831 aa20.91■□□□□ 0.94
RNF40-203ENST00000493683 FDPSP14324 419 aaKnown RBP20.9■□□□□ 0.94
RNF40-203ENST00000493683 MCL1Q07820 350 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 CRYMQ14894 314 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 CACHD1Q5VU97 1274 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 PAPD7Q5XG87 772 aaKnown RBP20.9■□□□□ 0.94
RNF40-203ENST00000493683 IPMKQ8NFU5 416 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 MYCBPAPQ8TBZ2 947 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 HIC2Q96JB3 615 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 TMBIM4Q9HC24 238 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 EXOSC4Q9NPD3 245 aaKnown RBP20.9■□□□□ 0.94
RNF40-203ENST00000493683 METTL5Q9NRN9 209 aaKnown RBP20.9■□□□□ 0.94
RNF40-203ENST00000493683 CRB1P82279 1406 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 RHOBTB1O94844 696 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 MAPK1P28482 360 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 CUL2Q13617 745 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 DDX42Q86XP3 938 aaKnown RBP eCLIP20.9■□□□□ 0.94
RNF40-203ENST00000493683 DDHD1Q8NEL9 900 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 TUBGCP3Q96CW5 907 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 UBE2OQ9C0C9 1292 aaKnown RBP20.9■□□□□ 0.94
RNF40-203ENST00000493683 MUC3BQ9H195 1237 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 AFF2P51816 1311 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 RRN3P2A6NIE6 340 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 VWA5AO00534 786 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 STRNO43815 780 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 GZMAP12544 262 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 ITGA4P13612 1032 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 ZC2HC1CQ53FD0 456 aaPredicted RBP20.9■□□□□ 0.94
RNF40-203ENST00000493683 MRNIPQ6NTE8 343 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 TRIM65Q6PJ69 517 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 SAMD3Q8N6K7 520 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 ZNF280CQ8ND82 737 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 SLC24A2Q9UI40 661 aa20.9■□□□□ 0.94
RNF40-203ENST00000493683 AAR2Q9Y312 384 aaKnown RBP20.9■□□□□ 0.94
RNF40-203ENST00000493683 ENO4A6NNW6 628 aa20.89■□□□□ 0.94
RNF40-203ENST00000493683 UBTFL6P0CB48 400 aaPredicted RBP20.89■□□□□ 0.94
RNF40-203ENST00000493683 CALB2P22676 271 aa20.89■□□□□ 0.94
RNF40-203ENST00000493683 NUDT2P50583 147 aa20.89■□□□□ 0.94
RNF40-203ENST00000493683 DNAJC3Q13217 504 aa20.89■□□□□ 0.94
RNF40-203ENST00000493683 GPR141Q7Z602 305 aa20.89■□□□□ 0.94
RNF40-203ENST00000493683 AGPAT3Q9NRZ7 376 aa20.89■□□□□ 0.94
RNF40-203ENST00000493683 HEATR9A2RTY3 570 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 IMPDH2P12268 514 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 CACNB2Q08289 660 aaPredicted RBP20.89■□□□□ 0.93
RNF40-203ENST00000493683 PPP4R4Q6NUP7 873 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 UNC45BQ8IWX7 931 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 ZNF34Q8IZ26 560 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 SLC7A5P2Q9GIP4 190 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 DCLRE1BQ9H816 532 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 JMJD4Q9H9V9 463 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 SMARCAL1Q9NZC9 954 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 CLCA2Q9UQC9 943 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 CYP11B2P19099 503 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 MROH9Q5TGP6 573 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 DIS3LQ8TF46 1054 aaKnown RBP20.89■□□□□ 0.93
RNF40-203ENST00000493683 OPTNQ96CV9 577 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 HES6Q96HZ4 224 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 SYCP2LQ5T4T6 812 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 RMND5AQ9H871 391 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.89■□□□□ 0.93
RNF40-203ENST00000493683 ERAP1Q9NZ08 941 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 ZNRF3Q9ULT6 936 aa20.89■□□□□ 0.93
RNF40-203ENST00000493683 KCNJ1P48048 391 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 PPP3CCP48454 512 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 ZCWPW2Q504Y3 356 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 DCAF6Q58WW2 860 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 KLF6Q99612 283 aaPredicted RBP20.88■□□□□ 0.93
RNF40-203ENST00000493683 SYBUQ9NX95 663 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 TBX20Q9UMR3 447 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 LZTS3O60299 673 aaPredicted RBP20.88■□□□□ 0.93
RNF40-203ENST00000493683 FKBP6O75344 327 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 GRK2P25098 689 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 NFIXQ14938 502 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 OLFML2BQ68BL8 750 aa20.88■□□□□ 0.93
RNF40-203ENST00000493683 TTC30BQ8N4P2 665 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms