RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 GTF3C4Q9UKN8 822 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 ITGA11Q9UKX5 1188 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 SLC8A2Q9UPR5 921 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 PCDHB13Q9Y5F0 798 aa18.67■□□□□ 0.58
COL9A1-210ENST00000493682 GOLGA8IPA6NC78 632 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 GOLGA8JA6NMD2 632 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 RNF40O75150 1001 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 LDHAP00338 332 aaKnown RBP18.66■□□□□ 0.58
COL9A1-210ENST00000493682 IDEP14735 1019 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 TXLNAP40222 546 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 GALK1P51570 392 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 SF3A2Q15428 464 aaKnown RBP18.66■□□□□ 0.58
COL9A1-210ENST00000493682 CCDC142Q17RM4 750 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 NAIF1Q69YI7 327 aaPredicted RBP18.66■□□□□ 0.58
COL9A1-210ENST00000493682 CACNA2D4Q7Z3S7 1137 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 KBTBD6Q86V97 674 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 OSTM1Q86WC4 334 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 SYCP3Q8IZU3 236 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 TRMT2BQ96GJ1 504 aaKnown RBP18.66■□□□□ 0.58
COL9A1-210ENST00000493682 LOXL4Q96JB6 756 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 MYRFLQ96LU7 910 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 CBWD1Q9BRT8 395 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 FGFBP2Q9BYJ0 223 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 ARRDC1-AS1Q9H2J1 176 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 POLR3BQ9NW08 1133 aaPredicted RBP18.66■□□□□ 0.58
COL9A1-210ENST00000493682 SIX4Q9UIU6 781 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 SNX9Q9Y5X1 595 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 OBSL1O75147 1896 aa18.66■□□□□ 0.58
COL9A1-210ENST00000493682 HCRTO43612 131 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 KRT19P08727 400 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 DRD1P21728 446 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 GJA4P35212 333 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 RAP1GAPP47736 663 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 RBP5P82980 135 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 MTF1Q14872 753 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 CCDC6Q16204 474 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 ADGRF2Q8IZF7 708 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 TOP6BLQ8N6T0 577 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 SPATA18Q8TC71 538 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 SLC22A12Q96S37 553 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 CYP2S1Q96SQ9 504 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 P2RY13Q9BPV8 354 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 PCIF1Q9H4Z3 704 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 PDE11AQ9HCR9 933 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 TRPC7Q9HCX4 862 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 RALGAPA1Q6GYQ0 2036 aa18.65■□□□□ 0.58
COL9A1-210ENST00000493682 FRMD3A2A2Y4 597 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 GABRDO14764 452 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 EPN2O95208 641 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 CCDC192P0DO97 292 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 LHX1P48742 406 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 FAM160A1Q05DH4 1040 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 CUL4AQ13619 759 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 ALCAMQ13740 583 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 ZNF77Q15935 545 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 SOWAHAQ2M3V2 549 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 CFAP221Q4G0U5 840 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 AASDHQ4L235 1098 aaPredicted RBP18.64■□□□□ 0.57
COL9A1-210ENST00000493682 FAM173BQ6P4H8 233 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 CCDC73Q6ZRK6 1079 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 SPATA2LQ8IUW3 424 aaPredicted RBP18.64■□□□□ 0.57
COL9A1-210ENST00000493682 CPA6Q8N4T0 437 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 CAMKK1Q8N5S9 505 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 TTC16Q8NEE8 873 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 NOC3LQ8WTT2 800 aaKnown RBP18.64■□□□□ 0.57
COL9A1-210ENST00000493682 OSCP1Q8WVF1 389 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 PANK2Q9BZ23 570 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 MTMR12Q9C0I1 747 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 TMEM206Q9H813 350 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 ECT2Q9H8V3 914 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 PANK4Q9NVE7 773 aa18.64■□□□□ 0.57
COL9A1-210ENST00000493682 DUS2Q9NX74 493 aaKnown RBP18.64■□□□□ 0.57
COL9A1-210ENST00000493682 ZNF638Q14966 1978 aaKnown RBP18.63■□□□□ 0.57
COL9A1-210ENST00000493682 A0A087X0B3 334 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 TRAV19A0A0A6YYK7 116 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 AKAP3O75969 853 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 KRT37O76014 449 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 CKMP06732 381 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 USP17L7P0C7H9 530 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 ZNF806P0C7X5 589 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 PDCP20941 246 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 PCSK1P29120 753 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 STAT6P42226 847 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 LIMK1P53667 647 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 CEBPZQ03701 1054 aaKnown RBP18.63■□□□□ 0.57
COL9A1-210ENST00000493682 USP4Q13107 963 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 RESTQ13127 1097 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 FBXO43Q4G163 708 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 SCN4BQ8IWT1 228 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 C12orf50Q8NA57 414 aaPredicted RBP18.63■□□□□ 0.57
COL9A1-210ENST00000493682 DDX1Q92499 740 aaKnown RBP18.63■□□□□ 0.57
COL9A1-210ENST00000493682 ATP2A3Q93084 1043 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 FUBP3Q96I24 572 aaKnown RBP eCLIP18.63■□□□□ 0.57
COL9A1-210ENST00000493682 ZC3H10Q96K80 434 aaKnown RBP18.63■□□□□ 0.57
COL9A1-210ENST00000493682 HHIPQ96QV1 700 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 RXFP3Q9NSD7 469 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 GCNT4Q9P109 453 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 WNT6Q9Y6F9 365 aa18.63■□□□□ 0.57
COL9A1-210ENST00000493682 EPG5Q9HCE0 2579 aa18.62■□□□□ 0.57
COL9A1-210ENST00000493682 ATP2C2O75185 946 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms