RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SDCBP2Q9H190 292 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 PLEKHA4Q9H4M7 779 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 CYP4F11Q9HBI6 524 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 APOBEC3GQ9HC16 384 aaKnown RBP12.37□□□□□ -0.43
CTSA-209ENST00000493522 FANCLQ9NW38 375 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 TAB2Q9NYJ8 693 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 GCNT4Q9P109 453 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 AFF4Q9UHB7 1163 aaKnown RBP12.37□□□□□ -0.43
CTSA-209ENST00000493522 COQ4Q9Y3A0 265 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 DOCK8Q8NF50 2099 aa12.37□□□□□ -0.43
CTSA-209ENST00000493522 MTMR11A4FU01 709 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 A8MXQ7 604 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 GABRDO14764 452 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 ZMYND10O75800 440 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 ABLIM3O94929 683 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 TPM2P07951 284 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 PDGFRBP09619 1106 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 ATF2P15336 505 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 NPR3P17342 541 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 CD58P19256 250 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 RFX1P22670 979 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 GNL1P36915 607 aaPredicted RBP12.36□□□□□ -0.43
CTSA-209ENST00000493522 ZNF165P49910 485 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 CDH8P55286 799 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 GPR17Q13304 367 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 ANGPT1Q15389 498 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 CCDC142Q17RM4 750 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 TCP11X2Q5H9J9 407 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 CDKAL1Q5VV42 579 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 ERMP1Q7Z2K6 904 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 ANKRD20A12PQ8NF67 263 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 FEZF2Q8TBJ5 459 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 BPIFA3Q9BQP9 254 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 ACBD6Q9BR61 282 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 TUBGCP2Q9BSJ2 902 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 BCO2Q9BYV7 579 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 RHOBTB2Q9BYZ6 727 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 ABI2Q9NYB9 513 aaPredicted RBP12.36□□□□□ -0.43
CTSA-209ENST00000493522 CDH9Q9ULB4 789 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 NME7Q9Y5B8 376 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 INSL5Q9Y5Q6 135 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 DMXL1Q9Y485 3027 aa12.36□□□□□ -0.43
CTSA-209ENST00000493522 CCDC195A0A1B0GUA6 201 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 BECN2A8MW95 431 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 STK25O00506 426 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 PMM2O15305 246 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 CCL16O15467 120 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 PI15O43692 258 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 SEC24AO95486 1093 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 VNN2O95498 520 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 LRG1P02750 347 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 LMO2P25791 158 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 GBP2P32456 591 aaPredicted RBP12.35□□□□□ -0.43
CTSA-209ENST00000493522 ORC1Q13415 861 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 NCAPHQ15003 741 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 KRT31Q15323 416 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 NFE2Q16621 373 aaPredicted RBP12.35□□□□□ -0.43
CTSA-209ENST00000493522 VWA3BQ502W6 1294 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 MDH1BQ5I0G3 518 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 LRRTM3Q86VH5 581 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 SPATA2LQ8IUW3 424 aaPredicted RBP12.35□□□□□ -0.43
CTSA-209ENST00000493522 TCEAL8Q8IYN2 117 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 TTC9BQ8N6N2 239 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 DTWD2Q8NBA8 298 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 SMG7Q92540 1137 aaKnown RBP12.35□□□□□ -0.43
CTSA-209ENST00000493522 TATDN2Q93075 761 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 NXPE3Q969Y0 559 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 MYLPFQ96A32 169 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 SEPT5Q99719 369 aaPredicted RBP12.35□□□□□ -0.43
CTSA-209ENST00000493522 ARID3AQ99856 593 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 CRACR2AQ9BSW2 395 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 INTS2Q9H0H0 1204 aaKnown RBP12.35□□□□□ -0.43
CTSA-209ENST00000493522 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 CYP3A43Q9HB55 503 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 PIDD1Q9HB75 910 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 WDR6Q9NNW5 1121 aaKnown RBP12.35□□□□□ -0.43
CTSA-209ENST00000493522 CRTAC1Q9NQ79 661 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 TMLHEQ9NVH6 421 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 ZDHHC7Q9NXF8 308 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 WNT16Q9UBV4 365 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 HMGXB4Q9UGU5 601 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 YIPF1Q9Y548 306 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 PCDHB5Q9Y5E4 795 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 NUP210Q8TEM1 1887 aaPredicted RBP12.35□□□□□ -0.43
CTSA-209ENST00000493522 ZNF292O60281 2723 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 HELZP42694 1942 aaKnown RBP12.35□□□□□ -0.43
CTSA-209ENST00000493522 ANAPC1Q9H1A4 1944 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 CLUHO75153 1309 aa12.35□□□□□ -0.43
CTSA-209ENST00000493522 MYBPHLA2RUH7 354 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 NARSO43776 548 aaKnown RBP12.34□□□□□ -0.43
CTSA-209ENST00000493522 ATP2C2O75185 946 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 XYLBO75191 536 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 HNRNPA1P09651 372 aaKnown RBP eCLIP12.34□□□□□ -0.43
CTSA-209ENST00000493522 FAM163BP0C2L3 166 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 TRIM21P19474 475 aaKnown RBP12.34□□□□□ -0.43
CTSA-209ENST00000493522 CDK11BP21127 795 aaKnown RBP12.34□□□□□ -0.43
CTSA-209ENST00000493522 TBXAS1P24557 533 aaPredicted RBP12.34□□□□□ -0.43
CTSA-209ENST00000493522 ID4P47928 161 aa12.34□□□□□ -0.43
CTSA-209ENST00000493522 NDST1P52848 882 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms