RNA–Protein interactions for RNA: ENST00000493220.5

NF1-215, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 5,691 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-215ENST00000493220 SNX27Q96L92 541 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 KLC2Q9H0B6 622 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 DHX35Q9H5Z1 703 aaKnown RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 IGFLR1Q9H665 355 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 IL23AQ9NPF7 189 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.6□□□□□ -1.35
NF1-215ENST00000493220 ZMYND8Q9ULU4 1186 aaPredicted RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 ANO9A1A5B4 782 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 F5H5T6 163 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 DHX15O43143 795 aaKnown RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 NDST1P52848 882 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 DYNLT1P63172 113 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 HTRA3P83110 453 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 ZNF200P98182 395 aaPredicted RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 CCDC62Q6P9F0 684 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 DDX53Q86TM3 631 aaKnown RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 AFAP1L2Q8N4X5 818 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 POP1Q99575 1024 aaKnown RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 UPF3AQ9H1J1 476 aaKnown RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 DOCK1Q14185 1865 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 GRID2IPA4D2P6 1211 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 SLC9A3R1O14745 358 aaPredicted RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 CXCL14O95715 111 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 GLUD1P00367 558 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 NFICP08651 508 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 RHOXF2BP0C7M4 288 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 LAMB3Q13751 1172 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 C9orf57Q5W0N0 161 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 CSGALNACT1Q8TDX6 532 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 LENG9Q96B70 501 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 RHOXF2Q9BQY4 288 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 METTL5Q9NRN9 209 aaKnown RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 SLC25A13Q9UJS0 675 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 FAM170AA1A519 330 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 PALMO75781 387 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 CSH1P0DML2 217 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 CSH2P0DML3 217 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 ETFBP38117 255 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 ZNF235Q14590 738 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 NPY5RQ15761 445 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 CDKAL1Q5VV42 579 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 TTC30AQ86WT1 665 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 FEZF2Q8TBJ5 459 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 RAB3IL1Q8TBN0 382 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 MAGOHBQ96A72 148 aaKnown RBP6.6□□□□□ -1.35
NF1-215ENST00000493220 MCEEQ96PE7 176 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 PSMB7Q99436 277 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 MUC3BQ9H195 1237 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 ASAH2Q9NR71 780 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 LAMA4Q16363 1823 aa6.6□□□□□ -1.35
NF1-215ENST00000493220 TRAV19A0A0A6YYK7 116 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 A0A0B4J269 797 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 B4GALT5O43286 388 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 CYP11B1P15538 503 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 MX2P20592 715 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 ARSHQ5FYA8 562 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 CDCA2Q69YH5 1023 aaPredicted RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 OTOP2Q7RTS6 562 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 ECHDC2Q86YB7 292 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 MCOLN1Q9GZU1 580 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 FZD8Q9H461 694 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 ZNF510Q9Y2H8 683 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 PITPNM1O00562 1244 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 KLRC4O43908 158 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 ATP2C2O75185 946 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 BCAR1P56945 870 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 ETF1P62495 437 aaKnown RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 ROR1Q01973 937 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 DCAF6Q58WW2 860 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 BSPRYQ5W0U4 402 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 GAS2L3Q86XJ1 694 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 ATP2A3Q93084 1043 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 FRMD8P1Q9BZ68 369 aaPredicted RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 MAGEB5Q9BZ81 275 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 NSRP1Q9H0G5 558 aaKnown RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 ARHGAP42A6NI28 874 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 FTCDO95954 541 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 PIGRP01833 764 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 S100BP04271 92 aaPredicted RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 PTPN1P18031 435 aaKnown RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 TYMPP19971 482 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 CDC25CP30307 473 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 CYP2C18P33260 490 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 ZNF135P52742 658 aaPredicted RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 ACCSLQ4AC99 568 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 CCDC92Q53HC0 331 aaPredicted RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 PDE12Q6L8Q7 609 aaKnown RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 SLC35F6Q8N357 371 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 ATPAF2Q8N5M1 289 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 C1orf131Q8NDD1 294 aaKnown RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 SERPINB11Q96P15 392 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 XPO6Q96QU8 1125 aaKnown RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 KDM4CQ9H3R0 1056 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 NXF3Q9H4D5 531 aaKnown RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 ELAC1Q9H777 363 aaKnown RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 VPS37BQ9H9H4 285 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 KLHL8Q9P2G9 620 aaPredicted RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 PHIPQ8WWQ0 1821 aa6.59□□□□□ -1.35
NF1-215ENST00000493220 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.59□□□□□ -1.35
NF1-215ENST00000493220 ARL5CA6NH57 179 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms