RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 BCLAF3A2AJT9 711 aaKnown RBP14.73□□□□□ -0.05
SAMM50-204ENST00000493161 C2orf78A6NCI8 922 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 C4orf47A7E2U8 309 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 EIF5BO60841 1220 aaKnown RBP14.73□□□□□ -0.05
SAMM50-204ENST00000493161 NOL4O94818 638 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 CAVIN2O95810 425 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 ITGB3P05106 788 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 CSH1P0DML2 217 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 CSH2P0DML3 217 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 GJB2P29033 226 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 TFAMQ00059 246 aaKnown RBP14.73□□□□□ -0.05
SAMM50-204ENST00000493161 TSPY1Q01534 308 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 FAM160A1Q05DH4 1040 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 PSMD2Q13200 908 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 EML3Q32P44 896 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 SLFN12LQ6IEE8 588 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 USP49Q70CQ1 688 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 DYMQ7RTS9 669 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 ZNF720Q7Z2F6 126 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 CPA6Q8N4T0 437 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 ARL14EPQ8N8R7 260 aaPredicted RBP14.73□□□□□ -0.05
SAMM50-204ENST00000493161 C1orf127Q8N9H9 656 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 CXorf38Q8TB03 319 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 OSCP1Q8WVF1 389 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 POMGNT1Q8WZA1 660 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 LARP4BQ92615 738 aaKnown RBP14.73□□□□□ -0.05
SAMM50-204ENST00000493161 CD101Q93033 1021 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 SAAL1Q96ER3 474 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 FAM213AQ9BRX8 229 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 ST6GALNAC4Q9H4F1 302 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 DDX43Q9NXZ2 648 aaKnown RBP14.73□□□□□ -0.05
SAMM50-204ENST00000493161 EBF1Q9UH73 591 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 GTF3C4Q9UKN8 822 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 AGAP1Q9UPQ3 857 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 MYO16Q9Y6X6 1858 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 KIAA1549LQ6ZVL6 1849 aa14.73□□□□□ -0.05
SAMM50-204ENST00000493161 SOBPA7XYQ1 873 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 C1QTNF9BB2RNN3 333 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 H3BQV1 296 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 SLC26A4O43511 780 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 PPP1R37O75864 691 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 CD2BP2O95400 341 aaKnown RBP14.72□□□□□ -0.05
SAMM50-204ENST00000493161 APBB3O95704 486 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 TOP3BO95985 862 aaKnown RBP14.72□□□□□ -0.05
SAMM50-204ENST00000493161 NEFLP07196 543 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 C1QTNF9P0C862 333 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 SPINK2P20155 84 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 DGKEP52429 567 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 ZXDBP98169 803 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 AMPD2Q01433 879 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 USP4Q13107 963 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 NFE2Q16621 373 aaPredicted RBP14.72□□□□□ -0.05
SAMM50-204ENST00000493161 FBXO43Q4G163 708 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 INTS6LQ5JSJ4 861 aaKnown RBP14.72□□□□□ -0.05
SAMM50-204ENST00000493161 RASSF8Q8NHQ8 419 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 LEO1Q8WVC0 666 aaPredicted RBP14.72□□□□□ -0.05
SAMM50-204ENST00000493161 TRMT2BQ96GJ1 504 aaKnown RBP14.72□□□□□ -0.05
SAMM50-204ENST00000493161 MYRFLQ96LU7 910 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 ZNF560Q96MR9 790 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 ACBD6Q9BR61 282 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 STRA6Q9BX79 667 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 TPSD1Q9BZJ3 242 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 TBC1D7Q9P0N9 293 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 GCNT4Q9P109 453 aa14.72□□□□□ -0.05
SAMM50-204ENST00000493161 LNP1A1A4G5 178 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 PATE3B3GLJ2 98 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 ATP2C2O75185 946 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 RHOBTB1O94844 696 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 IL18RAPO95256 599 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 CKMP06732 381 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 USP17L7P0C7H9 530 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 BCKDHBP21953 392 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 GBP1P32455 592 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 DDIT3P35638 169 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 IFNAR2P48551 515 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 NOVA1P51513 510 aaKnown RBP14.71□□□□□ -0.05
SAMM50-204ENST00000493161 SEC13P55735 322 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 RPL10AP62906 217 aaKnown RBP14.71□□□□□ -0.05
SAMM50-204ENST00000493161 ELF2Q15723 593 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 SFTPA1Q8IWL2 248 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 SCN4BQ8IWT1 228 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 SH3RF2Q8TEC5 729 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 EPSTI1Q96J88 318 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 TMX3Q96JJ7 454 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 KIF3AQ9Y496 699 aa14.71□□□□□ -0.05
SAMM50-204ENST00000493161 TRAV19A0A0A6YYK7 116 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 GOLGA8IPA6NC78 632 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 GOLGA8JA6NMD2 632 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 K7EQS6 105 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 HUS1O60921 280 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 PROS1P07225 676 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 LONP1P36776 959 aaKnown RBP14.7□□□□□ -0.06
SAMM50-204ENST00000493161 OPRD1P41143 372 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 PNPLA4P41247 253 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 CASP5P51878 434 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 POU5F1Q01860 360 aaKnown RBP14.7□□□□□ -0.06
SAMM50-204ENST00000493161 MESP2Q0VG99 397 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 GAB4Q2WGN9 574 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 C2orf27AQ580R0 203 aa14.7□□□□□ -0.06
SAMM50-204ENST00000493161 CCDC33Q8N5R6 958 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms