RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 TSC2P49815 1807 aa9.96□□□□□ -0.81
CSTF1-206ENST00000493039 HIDE1A8MVS5 230 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 PAEPP09466 180 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 PTPN1P18031 435 aaKnown RBP9.96□□□□□ -0.82
CSTF1-206ENST00000493039 PRKCIP41743 596 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 PTK2Q05397 1052 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 PRPF38BQ5VTL8 546 aaKnown RBP9.96□□□□□ -0.82
CSTF1-206ENST00000493039 SFMBT2Q5VUG0 894 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 SLC8B1Q6J4K2 584 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 ZNF571Q7Z3V5 609 aaPredicted RBP9.96□□□□□ -0.82
CSTF1-206ENST00000493039 PALB2Q86YC2 1186 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 CNGA4Q8IV77 575 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 B3GALNT2Q8NCR0 500 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 ZNF397Q8NF99 534 aaPredicted RBP9.96□□□□□ -0.82
CSTF1-206ENST00000493039 ZNF606Q8WXB4 792 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 ARNTL2Q8WYA1 636 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 SYT15Q9BQS2 421 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 C11orf84Q9BUA3 381 aaPredicted RBP9.96□□□□□ -0.82
CSTF1-206ENST00000493039 ZCWPW1Q9H0M4 648 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 MYO9BQ13459 2157 aa9.96□□□□□ -0.82
CSTF1-206ENST00000493039 SMAPO00193 183 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 FSCN2O14926 492 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 SSTR3P32745 418 aaPredicted RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 GLUD2P49448 558 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 YWHAEP62258 255 aaKnown RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 GPM6BQ13491 265 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 PSMD5Q16401 504 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 ASTE1Q2TB18 679 aaPredicted RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 CTXN3Q4LDR2 81 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 INTS6LQ5JSJ4 861 aaKnown RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 PPP1R26Q5T8A7 1209 aaPredicted RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 SMYD5Q6GMV2 418 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 ANKS3Q6ZW76 656 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 METTL23Q86XA0 190 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 FUKQ8N0W3 1084 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 TTC39CQ8N584 583 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 FBXO22Q8NEZ5 403 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 HEXIM2Q96MH2 286 aaKnown RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 SAMD11Q96NU1 681 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 PANX2Q96RD6 677 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 PCDHB18PQ96TA0 734 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 B3GNT5Q9BYG0 378 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 TTYH1Q9H313 450 aaPredicted RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 HAUS4Q9H6D7 363 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 RXFP1Q9HBX9 757 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 FAM49BQ9NUQ9 324 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 CDH9Q9ULB4 789 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 BACE2Q9Y5Z0 518 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 IRAK3Q9Y616 596 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 CDY1Q9Y6F8 540 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 PLXNA4Q9HCM2 1894 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 O00370 1275 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 CLDN5O00501 218 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 TEX28O15482 410 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 CNPP09543 421 aaKnown RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 CCDC130P13994 396 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 FERP16591 822 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 NAT1P18440 290 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 PCSK1P29120 753 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 CACNA2D1P54289 1103 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 UBE3AQ05086 875 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 KIAA1841Q6NSI8 718 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 TMC7Q7Z402 723 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 GPR65Q8IYL9 337 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 MRPL43Q8N983 215 aaKnown RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 MYCBPAPQ8TBZ2 947 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 PCED1BQ96HM7 432 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 ARPC5LQ9BPX5 153 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 TCF25Q9BQ70 676 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 RHOBTB2Q9BYZ6 727 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 NUCKS1Q9H1E3 243 aaKnown RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 CRISPLD1Q9H336 500 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 SUDS3Q9H7L9 328 aaPredicted RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 PUF60Q9UHX1 559 aaKnown RBP9.95□□□□□ -0.82
CSTF1-206ENST00000493039 UNC80Q8N2C7 3258 aa9.95□□□□□ -0.82
CSTF1-206ENST00000493039 ARHGEF37A1IGU5 675 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 WDR27A2RRH5 827 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 C2orf71A6NGG8 1288 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 CSPG5O95196 566 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 CXCL14O95715 111 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 MMEP08473 750 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 GNA15P30679 374 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 OR1D2P34982 312 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 FMO1Q01740 532 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 PKDCCQ504Y2 493 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 MDH1BQ5I0G3 518 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 TTC30AQ86WT1 665 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 LRRC8AQ8IWT6 810 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 THEM5Q8N1Q8 247 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 WDTC1Q8N5D0 677 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 ATAD1Q8NBU5 361 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 SLC30A5Q8TAD4 765 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 SLC2A14Q8TDB8 520 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 GDPD5Q8WTR4 605 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 CYFIP2Q96F07 1278 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 LRCH3Q96II8 777 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 ZNF576Q9H609 170 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 SLC24A3Q9HC58 644 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 TLR9Q9NR96 1032 aa9.94□□□□□ -0.82
CSTF1-206ENST00000493039 MRPL17Q9NRX2 175 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms