RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 PMM2O15305 246 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 SKAP2O75563 359 aaPredicted RBP7.43□□□□□ -1.22
HERC4-211ENST00000492996 C4BPAP04003 597 aaKnown RBP7.43□□□□□ -1.22
HERC4-211ENST00000492996 NAMPTP43490 491 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 PEX5P50542 639 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 GUCY1A3Q02108 690 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 TAP1Q03518 808 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 CLEC16AQ2KHT3 1053 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 GJC2Q5T442 439 aaPredicted RBP7.43□□□□□ -1.22
HERC4-211ENST00000492996 C11orf63Q6NUN7 778 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 TTC27Q6P3X3 843 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 FBXO16Q8IX29 292 aaPredicted RBP7.43□□□□□ -1.22
HERC4-211ENST00000492996 RNF149Q8NC42 400 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 ARMC2Q8NEN0 867 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 SPATA18Q8TC71 538 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 C1orf54Q8WWF1 131 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 LRRC45Q96CN5 670 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 MSANTD3Q96H12 275 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 FAM210AQ96ND0 272 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 FAM118BQ9BPY3 351 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 LRRC4CQ9HCJ2 640 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 ATP8B3O60423 1300 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 H0YCG3 227 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 TMEM189-UBE2V1I3L0A0 370 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 O00370 1275 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 CYP1A2P05177 515 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 ARL2P36404 184 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 NSFP46459 744 aaKnown RBP7.43□□□□□ -1.22
HERC4-211ENST00000492996 IGBP1P78318 339 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 GCNT1Q02742 428 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 SMAD4Q13485 552 aaKnown RBP7.43□□□□□ -1.22
HERC4-211ENST00000492996 PSMD6Q15008 389 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 ODF2Q5BJF6 829 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 ZFYVE27Q5T4F4 411 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 THNSL1Q8IYQ7 743 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 KIRREL3Q8IZU9 778 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 TMEM130Q8N3G9 435 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 FBXO25Q8TCJ0 367 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 BCAS4Q8TDM0 211 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 SEPT1Q8WYJ6 367 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 FAXDC2Q96IV6 333 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 NLRP4Q96MN2 994 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 FMO2Q99518 471 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 ERP44Q9BS26 406 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 HEMGNQ9BXL5 484 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 SUDS3Q9H7L9 328 aaPredicted RBP7.43□□□□□ -1.22
HERC4-211ENST00000492996 THEGQ9P2T0 379 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 G3BP2Q9UN86 482 aaKnown RBP7.43□□□□□ -1.22
HERC4-211ENST00000492996 NUB1Q9Y5A7 615 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 TTC3P53804 2025 aa7.43□□□□□ -1.22
HERC4-211ENST00000492996 NYNRINQ9P2P1 1898 aaKnown RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 TLDC2A0PJX2 215 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 THAP12O43422 761 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 CST3P01034 146 aaPredicted RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 GTF2H1P32780 548 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 CCT5P48643 541 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 VPS41P49754 854 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 NOP14P78316 857 aaKnown RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 IFFO1Q0D2I5 559 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 TRIP13Q15645 432 aaPredicted RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 C11orf91Q3C1V1 193 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 MARCH8Q5T0T0 291 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 CCDC137Q6PK04 289 aaKnown RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 SCARA5Q6ZMJ2 495 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 CCDC25Q86WR0 208 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 RHPN2Q8IUC4 686 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 MREGQ8N565 214 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 EFHBQ8N7U6 833 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 MAFAQ8NHW3 353 aaPredicted RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 ATG4AQ8WYN0 398 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 NXPE3Q969Y0 559 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 CCDC97Q96F63 343 aaPredicted RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 CEP295NLQ96MC4 621 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 RAB17Q9H0T7 212 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 TRPV5Q9NQA5 729 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 FAM114A2Q9NRY5 505 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 TTC7AQ9ULT0 858 aaPredicted RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 YBX2Q9Y2T7 364 aaKnown RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 PCDHB2Q9Y5E7 798 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 ZFP37Q9Y6Q3 630 aaPredicted RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 CNTNAP2Q9UHC6 1331 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 A0A0B4J269 797 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 INO80B-WBP1J3KQ70 363 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 MYO1FO00160 1098 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 ZNF623O75123 536 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 MYZAPP0CAP1 466 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 RARAP10276 462 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 SKIP12755 728 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 NR1D1P20393 614 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 GNA15P30679 374 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 CCNHP51946 323 aaPredicted RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 RWDD2BP57060 319 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 TFAMQ00059 246 aaKnown RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 MKRN3Q13064 507 aaKnown RBP7.42□□□□□ -1.22
HERC4-211ENST00000492996 CUL2Q13617 745 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 NCOA4Q13772 614 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 KRT71Q3SY84 523 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 FAM160B1Q5W0V3 765 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 C15orf39Q6ZRI6 1047 aa7.42□□□□□ -1.22
HERC4-211ENST00000492996 TSHZ1Q6ZSZ6 1077 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms