RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 SCN1AP35498 2009 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 SMTNL1A8MU46 457 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 ZNF197O14709 1029 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 CILPO75339 1184 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 MYL4P12829 197 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 GPR15P49685 360 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 ZNF165P49910 485 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 DDR2Q16832 855 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 ZSCAN23Q3MJ62 389 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 VSTM1Q6UX27 236 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 PDZD4Q76G19 769 aaPredicted RBP14.87□□□□□ -0.03
CCM2-217ENST00000492883 RRAGAQ7L523 313 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 AOPEPQ8N6M6 819 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 TDRD5Q8NAT2 981 aaKnown RBP14.87□□□□□ -0.03
CCM2-217ENST00000492883 ANKRD20A12PQ8NF67 263 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 GPR152Q8TDT2 470 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 HEXIM2Q96MH2 286 aaKnown RBP14.87□□□□□ -0.03
CCM2-217ENST00000492883 TWNKQ96RR1 684 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 ARID3AQ99856 593 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 BPIFA3Q9BQP9 254 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 B3GNT5Q9BYG0 378 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 ASAH2Q9NR71 780 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 TAB2Q9NYJ8 693 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.87□□□□□ -0.03
CCM2-217ENST00000492883 GCNT4Q9P109 453 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 HMGXB4Q9UGU5 601 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 ATP8B3O60423 1300 aa14.87□□□□□ -0.03
CCM2-217ENST00000492883 C19orf67A6NJJ6 358 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 BECN2A8MW95 431 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 C2CD4DB7Z1M9 353 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 CLDN5O00501 218 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 ATF6P18850 670 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 ANXA13P27216 316 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 MAGEA11P43364 429 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 EXOC3L4Q17RC7 722 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 SDHAF4Q5VUM1 108 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 CDKAL1Q5VV42 579 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 PLCD3Q8N3E9 789 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 C12orf29Q8N999 325 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 LEMD2Q8NC56 503 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 WHAMMQ8TF30 809 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 PSMG2Q969U7 264 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 TMEM176AQ96HP8 235 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 FUCA2Q9BTY2 467 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 ZNF518BQ9C0D4 1074 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 ELOVL4Q9GZR5 314 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 VPS16Q9H269 839 aa14.86□□□□□ -0.03
CCM2-217ENST00000492883 FAM124BQ9H5Z6 455 aaPredicted RBP14.86□□□□□ -0.03
CCM2-217ENST00000492883 UBE2TQ9NPD8 197 aaPredicted RBP14.86□□□□□ -0.03
CCM2-217ENST00000492883 GTPBP10A4D1E9 387 aaKnown RBP14.85□□□□□ -0.03
CCM2-217ENST00000492883 LOC730098B7Z3J9 87 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 TRIM66O15016 1216 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 CSH1P0DML2 217 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 CSH2P0DML3 217 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 CCDC130P13994 396 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 SLC9A1P19634 815 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 NCAPHQ15003 741 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 KRT31Q15323 416 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 MIIPQ5JXC2 388 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 ARHGEF19Q8IW93 802 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 ITFG1Q8TB96 612 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 SLC2A14Q8TDB8 520 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 CYFIP2Q96F07 1278 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 MYADMQ96S97 322 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 COL25A1Q9BXS0 654 aaPredicted RBP14.85□□□□□ -0.03
CCM2-217ENST00000492883 AVENQ9NQS1 362 aaPredicted RBP14.85□□□□□ -0.03
CCM2-217ENST00000492883 FAM49BQ9NUQ9 324 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 MAGED2Q9UNF1 606 aaPredicted RBP14.85□□□□□ -0.03
CCM2-217ENST00000492883 PCDHB4Q9Y5E5 795 aa14.85□□□□□ -0.03
CCM2-217ENST00000492883 FGF19O95750 216 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 PON1P27169 355 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 ADORA2BP29275 332 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 RAD23BP54727 409 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 EPHA5P54756 1037 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 GCNT1Q02742 428 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 SLC5A9Q2M3M2 681 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 PHLDB3Q6NSJ2 640 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 TRIM65Q6PJ69 517 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 FAM35AQ86V20 835 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 DHX40Q8IX18 779 aaKnown RBP14.84□□□□□ -0.03
CCM2-217ENST00000492883 ZDHHC14Q8IZN3 488 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 FUKQ8N0W3 1084 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 ING5Q8WYH8 240 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 FGF13Q92913 245 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 KAT5Q92993 513 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 TCEAL4Q96EI5 215 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 SMARCD1Q96GM5 515 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 C8orf48Q96LL4 319 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 ATXN3LQ9H3M9 355 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 CD320Q9NPF0 282 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 LIMD1Q9UGP4 676 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 CDH7Q9ULB5 785 aa14.84□□□□□ -0.03
CCM2-217ENST00000492883 PLXNA3P51805 1871 aa14.83□□□□□ -0.04
CCM2-217ENST00000492883 SLC38A8A6NNN8 435 aa14.83□□□□□ -0.04
CCM2-217ENST00000492883 F8VP50 259 aa14.83□□□□□ -0.04
CCM2-217ENST00000492883 LAMP2P13473 410 aa14.83□□□□□ -0.04
CCM2-217ENST00000492883 GJA1P17302 382 aa14.83□□□□□ -0.04
CCM2-217ENST00000492883 GABRR2P28476 465 aa14.83□□□□□ -0.04
CCM2-217ENST00000492883 CCR2P41597 374 aa14.83□□□□□ -0.04
CCM2-217ENST00000492883 MFAP3P55082 362 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms