RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 TBC1D3IA0A087WXS9 549 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 TBC1D3EA0A087X179 549 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 TBC1D3KA0A087X1G2 549 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 TBC1D3FA6NER0 549 aaPredicted RBP5.62□□□□□ -1.51
FN1-224ENST00000492816 TBC1D3LB9A6J9 549 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 F8W810 466 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 WWP2O00308 870 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 KERAO60938 352 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 TBC1D3HP0C7X1 549 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 CYP2C8P10632 490 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 IL1R1P14778 569 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 MAPK1P28482 360 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 ELK3P41970 407 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 TBC1D3GQ6DHY5 549 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 TBC1D3CQ6IPX1 549 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 RNF135Q8IUD6 432 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 DENND6AQ8IWF6 608 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 TBC1D3Q8IZP1 549 aaPredicted RBP5.62□□□□□ -1.51
FN1-224ENST00000492816 DENND1AQ8TEH3 1009 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 SMG7Q92540 1137 aaKnown RBP5.62□□□□□ -1.51
FN1-224ENST00000492816 ARL15Q9NXU5 204 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 ZMYM5Q9UJ78 669 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 A6NCN8 305 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 KLHL18O94889 574 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 NRLP54845 237 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 CCL23P55773 120 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 CDC16Q13042 620 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 EMC2Q15006 297 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 INAQ16352 499 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 CYP4F22Q6NT55 531 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 RHOT2Q8IXI1 618 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 DDIASQ8IXT1 998 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 AHI1Q8N157 1196 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 DNERQ8NFT8 737 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 PIGOQ8TEQ8 1089 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 REPS1Q96D71 796 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 FAM117AQ9C073 453 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 TMEM39BQ9GZU3 492 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 KLHL28Q9NXS3 571 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 VPS18Q9P253 973 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 GPSM3Q9Y4H4 160 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 NEMP2A6NFY4 417 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 PGK2P07205 417 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 PRKAR2AP13861 404 aaKnown RBP5.62□□□□□ -1.51
FN1-224ENST00000492816 CDH2P19022 906 aaPredicted RBP5.62□□□□□ -1.51
FN1-224ENST00000492816 ADORA2AP29274 412 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 TCF7P36402 384 aaPredicted RBP5.62□□□□□ -1.51
FN1-224ENST00000492816 MASP1P48740 699 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 SOX10P56693 466 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 HERVK_113P62684 666 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 LRRC63Q05C16 580 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 ACVR2BQ13705 512 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 MAN2A1Q16706 1144 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 NDUFA9Q16795 377 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 INSCQ1MX18 579 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 ALFQ53S48 1182 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 NFRKBQ6P4R8 1299 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 PID1Q7Z2X4 250 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 DPF2Q92785 391 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 USP7Q93009 1102 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 RASSF4Q9H2L5 321 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 TBC1D14Q9P2M4 693 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 RNF14Q9UBS8 474 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 GTF2A1LQ9UNN4 478 aa5.62□□□□□ -1.51
FN1-224ENST00000492816 FBXO21O94952 628 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 LMNAP02545 664 aaKnown RBP5.61□□□□□ -1.51
FN1-224ENST00000492816 JMJD7P0C870 316 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 SARSP49591 514 aaKnown RBP5.61□□□□□ -1.51
FN1-224ENST00000492816 PMS2P54278 862 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 ILF2Q12905 390 aaKnown RBP5.61□□□□□ -1.51
FN1-224ENST00000492816 SHROOM1Q2M3G4 852 aaPredicted RBP5.61□□□□□ -1.51
FN1-224ENST00000492816 MTHFD1LQ6UB35 978 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 LINC00523Q86TU6 105 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 ACOT1Q86TX2 421 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 SKAP1Q86WV1 359 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 TTC29Q8NA56 475 aaPredicted RBP5.61□□□□□ -1.51
FN1-224ENST00000492816 AVL9Q8NBF6 648 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 GPRASP2Q96D09 838 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 FAM161BQ96MY7 647 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 DEPDC7Q96QD5 511 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 PRRG3Q9BZD7 231 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 ARHGEF38Q9NXL2 777 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 CDHR2Q9BYE9 1310 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 SYCE1LA8MT33 242 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 VWA5AO00534 786 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 CYB561D2O14569 222 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 PRPF3O43395 683 aaKnown RBP5.61□□□□□ -1.51
FN1-224ENST00000492816 SLC25A12O75746 678 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 PLGLB1Q02325 96 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 MAPRE2Q15555 327 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 C11orf74Q86VG3 221 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 ARHGEF19Q8IW93 802 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 FAM13CQ8NE31 585 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 E2F7Q96AV8 911 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 PARVAQ9NVD7 372 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 DMTF1Q9Y222 760 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 MRPS33Q9Y291 106 aaKnown RBP5.61□□□□□ -1.51
FN1-224ENST00000492816 CHURC1-FNTBB4DL54 471 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 RBAK-RBAKDNI3L0D1 243 aa5.61□□□□□ -1.51
FN1-224ENST00000492816 RHOXF2BP0C7M4 288 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms