RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 ANKS1AQ92625 1134 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 SEC62Q99442 399 aaKnown RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.49□□□□□ -1.85
SNX13-209ENST00000492626 PAK6Q9NQU5 681 aaPredicted RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 LRRC37A2A6NM11 1700 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 PI4K2BG5E9Z4 385 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 GRM6O15303 877 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 HNRNPLP14866 589 aaKnown RBP eCLIP3.49□□□□□ -1.85
SNX13-209ENST00000492626 SEPT2Q15019 361 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 PRSS36Q5K4E3 855 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 ATPAF1Q5TC12 328 aaPredicted RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 SWSAP1Q6NVH7 229 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 TOM1L2Q6ZVM7 507 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 B3GNT8Q7Z7M8 397 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 STK32CQ86UX6 486 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 DEFB123Q8N688 67 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 SMARCC2Q8TAQ2 1214 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 SNX22Q96L94 193 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 EIF2AK1Q9BQI3 630 aaKnown RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 HEPHQ9BQS7 1158 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 FDXACB1Q9BRP7 624 aaPredicted RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 REXO4Q9GZR2 422 aaKnown RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 HEYLQ9NQ87 328 aaPredicted RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 ADARB2Q9NS39 739 aaKnown RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 SCOCQ9UIL1 159 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 LRRC37AA6NMS7 1700 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 LTBP2Q14767 1821 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 BTN3A1O00481 513 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 COL6A1P12109 1028 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 TSHRP16473 764 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 FGFR2P21802 821 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 PRDX5P30044 214 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 ETV4P43268 484 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 BPIFB4P59827 614 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 RPS16P62249 146 aaKnown RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 EXOSC9Q06265 439 aaKnown RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 FOXD4Q12950 439 aaPredicted RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 RSPO4Q2I0M5 234 aaPredicted RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 PABPC1LQ4VXU2 614 aaKnown RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 C3orf38Q5JPI3 329 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 CLEC4GQ6UXB4 293 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 SYDE1Q6ZW31 735 aaPredicted RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 ARHGEF25Q86VW2 580 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 STON2Q8WXE9 905 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 NMD3Q96D46 503 aaKnown RBP3.49□□□□□ -1.85
SNX13-209ENST00000492626 MRGPRX4Q96LA9 322 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 EPB41L4BQ9H329 900 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 PMF1-BGLAPU3KQ54 211 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 ATRNL1Q5VV63 1379 aa3.49□□□□□ -1.85
SNX13-209ENST00000492626 RRN3P2A6NIE6 340 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 NOTOA8MTQ0 251 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 HRKO00198 91 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 ITGA2BP08514 1039 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 SNRPA1P09661 255 aaKnown RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 IL6STP40189 918 aaPredicted RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 TMEM200BQ69YZ2 307 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 LAYNQ6UX15 382 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 ABHD15Q6UXT9 468 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 PIK3C3Q8NEB9 887 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 OR2I1PQ8NGU4 316 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 TBC1D20Q96BZ9 403 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 PPM1MQ96MI6 270 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 PPP1R9BQ96SB3 815 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 TAOK3Q9H2K8 898 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 SMC4Q9NTJ3 1288 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 MBNL3Q9NUK0 354 aaKnown RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 MAN2B2Q9Y2E5 1009 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 LAS1LQ9Y4W2 734 aaKnown RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 HCFC2Q9Y5Z7 792 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 SALL1Q9NSC2 1324 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 MT-ND5P03915 603 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 C8BP07358 591 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 GJB1P08034 283 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 GLI1P08151 1106 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 RARBP10826 455 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 NPR1P16066 1061 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 ITGA1P56199 1179 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 G3BP1Q13283 466 aaKnown RBP eCLIP3.48□□□□□ -1.85
SNX13-209ENST00000492626 MCTP2Q6DN12 878 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 UNC13DQ70J99 1090 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 TDHQ8IZJ6 230 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 CCDC89Q8N998 374 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 FBXO18Q8NFZ0 1043 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 MSLNLQ96KJ4 702 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 TIGD1Q96MW7 591 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 PPP1R16BQ96T49 567 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 PRPF18Q99633 342 aaKnown RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 CARD11Q9BXL7 1154 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 SAYSD1Q9NPB0 183 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 KCND1Q9NSA2 647 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 ARAP2Q8WZ64 1704 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 ECM29Q5VYK3 1845 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 TMEM8BA6NDV4 472 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 EIF3FO00303 357 aaPredicted RBP3.48□□□□□ -1.85
SNX13-209ENST00000492626 ITGA10O75578 1167 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 SASH1O94885 1247 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 MBD4O95243 580 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 AHSGP02765 367 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 VIPR1P32241 457 aa3.48□□□□□ -1.85
SNX13-209ENST00000492626 ELF1P32519 619 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms