RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 GPT2Q8TD30 523 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 WHAMMQ8TF30 809 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 TAF4BQ92750 862 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 TATDN2Q93075 761 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 NXPE3Q969Y0 559 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 SLC35C1Q96A29 364 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 MYLPFQ96A32 169 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 RSPRY1Q96DX4 576 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 PCED1BQ96HM7 432 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 TSG101Q99816 390 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 B3GNT5Q9BYG0 378 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 BCO2Q9BYV7 579 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 IRF2BPLQ9H1B7 796 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 SNX25Q9H3E2 840 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 MMRN2Q9H8L6 949 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 ABCB6Q9NP58 842 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 ASAH2Q9NR71 780 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 TMEM30AQ9NV96 361 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 GDE1Q9NZC3 331 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 HMGXB4Q9UGU5 601 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 DUSP12Q9UNI6 340 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 CTNND2Q9UQB3 1225 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 COQ4Q9Y3A0 265 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 NCANO14594 1321 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 ZNF318Q5VUA4 2279 aa7.68□□□□□ -1.18
PDLIM1-204ENST00000492511 SLC38A8A6NNN8 435 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 A8MXQ7 604 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 CLDN5O00501 218 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 TADA3O75528 432 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 F11P03951 625 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 NPR3P17342 541 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 BDNFP23560 247 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 GABRR2P28476 465 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 PPP1R2P41236 205 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 PIK3CAP42336 1068 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 MAGEA11P43364 429 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 GPC5P78333 572 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 ORC1Q13415 861 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 STIM1Q13586 685 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 KRT39Q6A163 491 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 FRMD5Q7Z6J6 570 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 IRF2BP1Q8IU81 584 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 SPATA2LQ8IUW3 424 aaPredicted RBP7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 SUGP1Q8IWZ8 645 aaKnown RBP7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 CRYBG2Q8N1P7 616 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 TRIML1Q8N9V2 468 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 LEMD2Q8NC56 503 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 B3GALNT2Q8NCR0 500 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 FUBP3Q96I24 572 aaKnown RBP eCLIP7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 CEP63Q96MT8 703 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 ASB16Q96NS5 453 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 LRRC3BQ96PB8 259 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 TWNKQ96RR1 684 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 KXD1Q9BQD3 176 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 ZNF518BQ9C0D4 1074 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 TRPV4Q9HBA0 871 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 RAB20Q9NX57 234 aa7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 MAGEC2Q9UBF1 373 aaPredicted RBP7.67□□□□□ -1.18
PDLIM1-204ENST00000492511 DOCK6Q96HP0 2047 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 BICDL2A1A5D9 508 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 KRBA1A5PL33 1030 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 ECI2O75521 394 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 NOL4O94818 638 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 SRFP11831 508 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 VIPR2P41587 438 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 MXI1P50539 228 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 NDST1P52848 882 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 MARSP56192 900 aaKnown RBP7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 NLRP12P59046 1061 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 USP46P62068 366 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 RPL10AP62906 217 aaKnown RBP7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 NOP14P78316 857 aaKnown RBP7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 CYP4F8P98187 520 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 CYP27A1Q02318 531 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 INCA1Q0VD86 236 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 PAK1Q13153 545 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 MAPRE1Q15691 268 aaKnown RBP7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 DCAF17Q5H9S7 520 aaPredicted RBP7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 VSTM1Q6UX27 236 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 C4orf50Q6ZRC1 276 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 MTSS1LQ765P7 747 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 ACOT1Q86TX2 421 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 ITIH5Q86UX2 942 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 GPIHBP1Q8IV16 184 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 TRIM59Q8IWR1 403 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 SCN4BQ8IWT1 228 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 FUKQ8N0W3 1084 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 C12orf29Q8N999 325 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 FBXL13Q8NEE6 735 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 LMO3Q8TAP4 145 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 ZSCAN18Q8TBC5 510 aaPredicted RBP7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 FAM200AQ8TCP9 573 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 SMARCD2Q92925 531 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 PBXIP1Q96AQ6 731 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 ELSPBP1Q96BH3 223 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 SPATA17Q96L03 361 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 MYRFLQ96LU7 910 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 SRRTQ9BXP5 876 aaKnown RBP7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 SLC46A2Q9BY10 475 aa7.66□□□□□ -1.18
PDLIM1-204ENST00000492511 ELOVL4Q9GZR5 314 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms