RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 ITGB3P05106 788 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 USP17L7P0C7H9 530 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 POLR2BP30876 1174 aaKnown RBP9.8□□□□□ -0.84
HDAC3-212ENST00000492407 PPP3CCP48454 512 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 SNRPFP62306 86 aaKnown RBP9.8□□□□□ -0.84
HDAC3-212ENST00000492407 TFAMQ00059 246 aaKnown RBP9.8□□□□□ -0.84
HDAC3-212ENST00000492407 FAM160A1Q05DH4 1040 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 TNK2Q07912 1038 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 SPEM2Q0P670 501 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 WDR44Q5JSH3 913 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 FAM171BQ6P995 826 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 VSTM1Q6UX27 236 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 C4orf50Q6ZRC1 276 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 PRR23CQ6ZRP0 262 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 Q6ZS52 159 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 CEP68Q76N32 757 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 CACNA2D4Q7Z3S7 1137 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 CCDC65Q8IXS2 484 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 SYCP3Q8IZU3 236 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 CSGALNACT2Q8N6G5 542 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 MAB21L3Q8N8X9 362 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 FSIP1Q8NA03 581 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 GAB3Q8WWW8 586 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 ZFYVE19Q96K21 471 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 ZC3H10Q96K80 434 aaKnown RBP9.8□□□□□ -0.84
HDAC3-212ENST00000492407 SPATA17Q96L03 361 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 CUEDC2Q9H467 287 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 HPS4Q9NQG7 708 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 TMLHEQ9NVH6 421 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 DDX43Q9NXZ2 648 aaKnown RBP9.8□□□□□ -0.84
HDAC3-212ENST00000492407 L1RE1Q9UN81 338 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 SLC8A2Q9UPR5 921 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 PCDHGA5Q9Y5G8 931 aa9.8□□□□□ -0.84
HDAC3-212ENST00000492407 TRAV19A0A0A6YYK7 116 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 VPS37CA5D8V6 355 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-212ENST00000492407 ZNF233A6NK53 670 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 ADRB1P08588 477 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 TMEM191BP0C7N4 346 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 ZNF806P0C7X5 589 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 SYT1P21579 422 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 STAT6P42226 847 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 RAP1GAPP47736 663 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 DMWDQ09019 674 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 KCNA1Q09470 495 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 RESTQ13127 1097 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 NR1H3Q13133 447 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 DUOXA2Q1HG44 320 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 TXNDC8Q6A555 127 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 FSTL4Q6MZW2 842 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 CNNM4Q6P4Q7 775 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 C11orf74Q86VG3 221 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 SPATA2LQ8IUW3 424 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-212ENST00000492407 GPIHBP1Q8IV16 184 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 GPD1LQ8N335 351 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 CPA6Q8N4T0 437 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 FAM160A2Q8N612 972 aaPredicted RBP9.79□□□□□ -0.84
HDAC3-212ENST00000492407 OSCP1Q8WVF1 389 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 ATP2A3Q93084 1043 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 ANKRD36BP1Q96IX9 119 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 P2RY13Q9BPV8 354 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 PI4K2AQ9BTU6 479 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 TNMDQ9H2S6 317 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 PANK4Q9NVE7 773 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 INTS13Q9NVM9 706 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 EBF1Q9UH73 591 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 CDH9Q9ULB4 789 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 MYH11P35749 1972 aa9.79□□□□□ -0.84
HDAC3-212ENST00000492407 RPP40O75818 363 aaKnown RBP9.78□□□□□ -0.84
HDAC3-212ENST00000492407 EPN2O95208 641 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 TNNC2P02585 160 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 IDEP14735 1019 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 WARSP23381 471 aaKnown RBP9.78□□□□□ -0.84
HDAC3-212ENST00000492407 CYP2F1P24903 491 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 NASPP49321 788 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-212ENST00000492407 GALK1P51570 392 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 AMPD3Q01432 767 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 MTF1Q14872 753 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 DDR2Q16832 855 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 SOWAHAQ2M3V2 549 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 SYT13Q7L8C5 426 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 ADGRF2Q8IZF7 708 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 TTC8Q8TAM2 541 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 ACDQ96AP0 544 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 SAAL1Q96ER3 474 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 CBWD1Q9BRT8 395 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 SMG9Q9H0W8 520 aaKnown RBP9.78□□□□□ -0.84
HDAC3-212ENST00000492407 EBF3Q9H4W6 596 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 ECT2Q9H8V3 914 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 KBTBD4Q9NVX7 518 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 DUS2Q9NX74 493 aaKnown RBP9.78□□□□□ -0.84
HDAC3-212ENST00000492407 GCNT4Q9P109 453 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 MAGEC2Q9UBF1 373 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-212ENST00000492407 SIX4Q9UIU6 781 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 GTF3C4Q9UKN8 822 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 ARHGAP26Q9UNA1 814 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 MAGED2Q9UNF1 606 aaPredicted RBP9.78□□□□□ -0.84
HDAC3-212ENST00000492407 CCL26Q9Y258 94 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 SNX9Q9Y5X1 595 aa9.78□□□□□ -0.84
HDAC3-212ENST00000492407 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.78□□□□□ -0.84
HDAC3-212ENST00000492407 NUP210Q8TEM1 1887 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms