RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 CHRDQ9H2X0 955 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 MAN1B1Q9UKM7 699 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 FRMD4BQ9Y2L6 1034 aa11.84□□□□□ -0.51
TMEM39A-211ENST00000491685 EML5Q05BV3 1969 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 GOLGA8IPA6NC78 632 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 GOLGA8JA6NMD2 632 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 BIN1O00499 593 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 ZNF263O14978 683 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 CETN3O15182 167 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 NCAM2O15394 837 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 HCRTO43612 131 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 LILRB5O75023 590 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 CCNE1P24864 410 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 POLR2BP30876 1174 aaKnown RBP11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 PRCPP42785 496 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 ADAM9Q13443 819 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 MORC3Q14149 939 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 MGAT5BQ3V5L5 792 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 GPR158Q5T848 1215 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 BRSK2Q8IWQ3 736 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 C1orf127Q8N9H9 656 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 ZBTB44Q8NCP5 570 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 KIAA0895Q8NCT3 520 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 CXorf38Q8TB03 319 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 GIPC2Q8TF65 315 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 ERCC4Q92889 916 aaPredicted RBP11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 CBWD1Q9BRT8 395 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 GPR88Q9GZN0 384 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 ATXN3LQ9H3M9 355 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 PCIF1Q9H4Z3 704 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 TRPV5Q9NQA5 729 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 RBM12Q9NTZ6 932 aaKnown RBP11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 ABI2Q9NYB9 513 aaPredicted RBP11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 MAPK8IP1Q9UQF2 711 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 TRAF3IP3Q9Y228 551 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 MRPS17Q9Y2R5 130 aaKnown RBP11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 PTPRJQ12913 1337 aa11.83□□□□□ -0.52
TMEM39A-211ENST00000491685 MAP1BP46821 2468 aaKnown RBP11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 KPNA7A9QM74 516 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 CLIC2O15247 247 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 TGFB1I1O43294 461 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 IL18RAPO95256 599 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 FGF19O95750 216 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 ITGB3P05106 788 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 HAPLN1P10915 354 aaPredicted RBP11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 CHRNB1P11230 501 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 NLRP12P59046 1061 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 FKBP3Q00688 224 aaKnown RBP11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 SATB1Q01826 763 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 LRRC63Q05C16 580 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 DMWDQ09019 674 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 FCHO2Q0JRZ9 810 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 TPD52L1Q16890 204 aaPredicted RBP11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 RSPO4Q2I0M5 234 aaPredicted RBP11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 EDRF1Q3B7T1 1238 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 SDHAF4Q5VUM1 108 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 LMBRD2Q68DH5 695 aaPredicted RBP11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 Q6ZS52 159 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 TMEM150AQ86TG1 271 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 OSTM1Q86WC4 334 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 NT5DC4Q86YG4 428 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 SLC9A9Q8IVB4 645 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 C12orf56Q8IXR9 622 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 RDH13Q8NBN7 331 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 RIN3Q8TB24 985 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 FAM200AQ8TCP9 573 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 TMEM174Q8WUU8 243 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 FNBP1Q96RU3 617 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 NELL2Q99435 816 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 LMAN1LQ9HAT1 526 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 AGPAT3Q9NRZ7 376 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 ANO10Q9NW15 660 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 C2orf42Q9NWW7 574 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 ZSCAN32Q9NX65 697 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 GTSE1Q9NYZ3 720 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 HSPBP1Q9NZL4 362 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 DSEQ9UL01 958 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 L1RE1Q9UN81 338 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 SMG5Q9UPR3 1016 aaKnown RBP11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 ASB3Q9Y575 518 aa11.82□□□□□ -0.52
TMEM39A-211ENST00000491685 MAN2B1O00754 1011 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 CHADO15335 359 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 KRT13P13646 458 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 HMGA1P17096 107 aaKnown RBP11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 SDHBP21912 280 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 ACAT1P24752 427 aaKnown RBP11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 CYP2J2P51589 502 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 TFAMQ00059 246 aaKnown RBP11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 TNK2Q07912 1038 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 NFIL3Q16649 462 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 SV2CQ496J9 727 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 CAVIN1Q6NZI2 390 aaKnown RBP11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 C1orf228Q6PIY5 440 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 ITIH5Q86UX2 942 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 METTL23Q86XA0 190 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 YAF2Q8IY57 180 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 PDCL2Q8N4E4 241 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 E2F7Q96AV8 911 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 ZNF560Q96MR9 790 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 PKMYT1Q99640 499 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms