RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-208	ENST00000491541	RFWD3	Q6PCD5	774 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	TPH2	Q8IWU9	490 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	ADGRF4	Q8IZF3	695 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	TTC8	Q8TAM2	541 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	AFG1L	Q8WV93	481 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	FAF2	Q96CS3	445 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	CCT7	Q99832	543 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	TMEM260	Q9NX78	707 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	BIN2	Q9UBW5	565 aa	Predicted RBP	10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	PRSS51	A0A1B0GVH4	220 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	EPHB2	P29323	1055 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	DSG1	Q02413	1049 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	ITPK1	Q13572	414 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	SEL1L2	Q5TEA6	688 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	MCOLN2	Q8IZK6	566 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	ZNF444	Q8N0Y2	327 aa	Predicted RBP	10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	ARHGEF1	Q92888	912 aa	Known RBP	10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	LENG1	Q96BZ8	264 aa	Predicted RBP	10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	SORT1	Q99523	831 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	IDI2	Q9BXS1	227 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	TMEM206	Q9H813	350 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	PTBP2	Q9UKA9	531 aa	Known RBP	10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	PCDHA12	Q9UN75	941 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	HIBADH	P31937	336 aa	Known RBP	10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	CRKL	P46109	303 aa	Known RBP	10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	SERPINB4	P48594	390 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	CASP4	P49662	377 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	ACAP1	Q15027	740 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	MAMDC4	Q6UXC1	1216 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	SEPT14	Q6ZU15	432 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	GPBP1	Q86WP2	473 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	SFR1	Q86XK3	245 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	GLYCTK	Q8IVS8	523 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	PPFIBP2	Q8ND30	876 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	ACMSD	Q8TDX5	336 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	WDR60	Q8WVS4	1066 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	RANBP9	Q96S59	729 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	PSD2	Q9BQI7	771 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	ARL8B	Q9NVJ2	186 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	DNAAF2	Q9NVR5	837 aa	Known RBP	10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	RIMS3	Q9UJD0	308 aa		10.8	□□□□□ -0.68
SREBF2-208	ENST00000491541	RNASEH1	O60930	286 aa	Known RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	ITGA2B	P08514	1039 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	USP17L8	P0C7I0	530 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	TARS	P26639	723 aa	Known RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	VPS41	P49754	854 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	CACNB1	Q02641	598 aa	Predicted RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	KCNJ11	Q14654	390 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	LONRF1	Q17RB8	773 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	CCDC105	Q8IYK2	499 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	SLC7A3	Q8WY07	619 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	LRRC39	Q96DD0	335 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	ERP27	Q96DN0	273 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	RIT2	Q99578	217 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	MAK16	Q9BXY0	300 aa	Known RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	FAM96A	Q9H5X1	160 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541		A0A1B0GVG6	124 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	CCDC160	A6NGH7	325 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	PFDN1	O60925	122 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	BMP10	O95393	424 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	MAGEA4	P43358	317 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	GABRB2	P47870	512 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	HSD17B4	P51659	736 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	TAP1	Q03518	808 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	TAF1B	Q53T94	588 aa	Predicted RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	C4orf22	Q6V702	233 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	RDM1	Q8NG50	284 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	DTX3L	Q8TDB6	740 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	LRRC8C	Q8TDW0	803 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	RUSC1	Q9BVN2	902 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	PLVAP	Q9BX97	442 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	IPO11	Q9UI26	975 aa	Known RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	FOXN3	O00409	490 aa	Predicted RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	CREB3	O43889	395 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	LSM8	O95777	96 aa	Known RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	LDHC	P07864	332 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	HSPA1A	P0DMV8	641 aa	Known RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	HSPA1B	P0DMV9	641 aa	Known RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	HARS2	P49590	506 aa	Known RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	CALCOCO2	Q13137	446 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	CCNI	Q14094	377 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	CLPP	Q16740	277 aa	Predicted RBP	10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	ANKRD20A4	Q4UJ75	823 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	ZFYVE27	Q5T4F4	411 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	KLC3	Q6P597	504 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	FAM186B	Q8IYM0	893 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	STMN2	Q93045	179 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	C8orf4	Q9NR00	106 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	NARF	Q9UHQ1	456 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	CEPT1	Q9Y6K0	416 aa		10.79	□□□□□ -0.68
SREBF2-208	ENST00000491541	IQCA1L	A6NCM1	817 aa		10.78	□□□□□ -0.68
SREBF2-208	ENST00000491541	CLASP2	O75122	1294 aa	Known RBP	10.78	□□□□□ -0.68
SREBF2-208	ENST00000491541	RPL34	P49207	117 aa	Known RBP	10.78	□□□□□ -0.68
SREBF2-208	ENST00000491541	MTTP	P55157	894 aa		10.78	□□□□□ -0.68
SREBF2-208	ENST00000491541	ZNF252P-AS1	Q0IIN9	211 aa		10.78	□□□□□ -0.68
SREBF2-208	ENST00000491541	SEPT7	Q16181	437 aa	Known RBP	10.78	□□□□□ -0.68
SREBF2-208	ENST00000491541	METTL21C	Q5VZV1	264 aa		10.78	□□□□□ -0.68
SREBF2-208	ENST00000491541	HHIPL2	Q6UWX4	724 aa		10.78	□□□□□ -0.68

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