RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 CCNL1Q9UK58 526 aaPredicted RBP5.23□□□□□ -1.57
PHC3-213ENST00000491258 TMA7Q9Y2S6 64 aaKnown RBP5.23□□□□□ -1.57
PHC3-213ENST00000491258 PCDHA3Q9Y5H8 950 aa5.23□□□□□ -1.57
PHC3-213ENST00000491258 MRFAP1Q9Y605 127 aa5.23□□□□□ -1.57
PHC3-213ENST00000491258 WDR17Q8IZU2 1322 aa5.23□□□□□ -1.57
PHC3-213ENST00000491258 FESP07332 822 aa5.22□□□□□ -1.57
PHC3-213ENST00000491258 SP2Q02086 613 aa5.22□□□□□ -1.57
PHC3-213ENST00000491258 LAYNQ6UX15 382 aa5.22□□□□□ -1.57
PHC3-213ENST00000491258 ZDHHC17Q8IUH5 632 aa5.22□□□□□ -1.57
PHC3-213ENST00000491258 DAZAP1Q96EP5 407 aaKnown RBP5.22□□□□□ -1.57
PHC3-213ENST00000491258 SLC46A1Q96NT5 459 aa5.22□□□□□ -1.57
PHC3-213ENST00000491258 FSD1LQ9BXM9 530 aa5.22□□□□□ -1.57
PHC3-213ENST00000491258 EBF3Q9H4W6 596 aa5.22□□□□□ -1.57
PHC3-213ENST00000491258 KLHL13Q9P2N7 655 aa5.22□□□□□ -1.57
PHC3-213ENST00000491258 SH2B3Q9UQQ2 575 aa5.22□□□□□ -1.57
PHC3-213ENST00000491258 AFG3L2Q9Y4W6 797 aa5.22□□□□□ -1.57
PHC3-213ENST00000491258 SOCS2O14508 198 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 BCAR3O75815 825 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 CLSTN1O94985 981 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 FTH1P19P0C7X4 201 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 ZNF134P52741 427 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 GTF2H3Q13889 308 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 CERKLQ49MI3 558 aaPredicted RBP5.21□□□□□ -1.58
PHC3-213ENST00000491258 FAM160B1Q5W0V3 765 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 FAM90A1Q86YD7 464 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 ADAMTS15Q8TE58 950 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 DDX17Q92841 729 aaKnown RBP5.21□□□□□ -1.58
PHC3-213ENST00000491258 RITA1Q96K30 269 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 GLOD4Q9HC38 313 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 POLHQ9Y253 713 aa5.21□□□□□ -1.58
PHC3-213ENST00000491258 E5RJQ4 531 aa5.2□□□□□ -1.58
PHC3-213ENST00000491258 ARHGAP40Q5TG30 622 aa5.2□□□□□ -1.58
PHC3-213ENST00000491258 FCRL6Q6DN72 434 aa5.2□□□□□ -1.58
PHC3-213ENST00000491258 PARS2Q7L3T8 475 aaKnown RBP5.2□□□□□ -1.58
PHC3-213ENST00000491258 CPA6Q8N4T0 437 aa5.2□□□□□ -1.58
PHC3-213ENST00000491258 NRACQ8N912 160 aa5.2□□□□□ -1.58
PHC3-213ENST00000491258 XAGE5Q8WWM1 108 aa5.2□□□□□ -1.58
PHC3-213ENST00000491258 R3HDM4Q96D70 268 aa5.2□□□□□ -1.58
PHC3-213ENST00000491258 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.2□□□□□ -1.58
PHC3-213ENST00000491258 MTMR4Q9NYA4 1195 aa5.2□□□□□ -1.58
PHC3-213ENST00000491258 HESX1Q9UBX0 185 aa5.2□□□□□ -1.58
PHC3-213ENST00000491258 FEZ2Q9UHY8 353 aaPredicted RBP5.2□□□□□ -1.58
PHC3-213ENST00000491258 ZDHHC8Q9ULC8 765 aa5.2□□□□□ -1.58
PHC3-213ENST00000491258 CCDC187A0A096LP49 1063 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 EXOC3O60645 756 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 PDE8BO95263 885 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 ARIH2O95376 493 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 FXR1P51114 621 aaKnown RBP eCLIP5.19□□□□□ -1.58
PHC3-213ENST00000491258 TPTEP56180 551 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 GPSM2P81274 684 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 PCBP2Q15366 365 aaKnown RBP eCLIP5.19□□□□□ -1.58
PHC3-213ENST00000491258 SHC4Q6S5L8 630 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 NECAB2Q7Z6G3 386 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 MRPL10Q7Z7H8 261 aaKnown RBP5.19□□□□□ -1.58
PHC3-213ENST00000491258 PNMA8AQ86V59 439 aaPredicted RBP5.19□□□□□ -1.58
PHC3-213ENST00000491258 RP9Q8TA86 221 aaKnown RBP5.19□□□□□ -1.58
PHC3-213ENST00000491258 ATG4AQ8WYN0 398 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 GLG1Q92896 1179 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 WDCPQ9H6R7 721 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 ABCF2Q9UG63 623 aa5.19□□□□□ -1.58
PHC3-213ENST00000491258 IGKV2D-30A0A075B6S6 120 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 POC1B-GALNT4F8VUJ3 575 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 IL1R2P27930 398 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 LOXL3P58215 753 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 LINC00205P59089 165 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 LILRA4P59901 499 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 LONRF3Q496Y0 759 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 SYDE2Q5VT97 1194 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 EFCAB2Q5VUJ9 269 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 KIRREL2Q6UWL6 708 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 SERPINA13PQ6UXR4 307 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 Q6ZWC4 215 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 HEATR3Q7Z4Q2 680 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 IRF2BP2Q7Z5L9 587 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 DDX42Q86XP3 938 aaKnown RBP eCLIP5.18□□□□□ -1.58
PHC3-213ENST00000491258 GALNT4Q8N4A0 578 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 PCSK9Q8NBP7 692 aaKnown RBP5.18□□□□□ -1.58
PHC3-213ENST00000491258 ABHD11Q8NFV4 315 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 PUS7Q96PZ0 661 aaKnown RBP5.18□□□□□ -1.58
PHC3-213ENST00000491258 MRPL46Q9H2W6 279 aaKnown RBP5.18□□□□□ -1.58
PHC3-213ENST00000491258 TRHDEQ9UKU6 1024 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 SSX2IPQ9Y2D8 614 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 LRP12Q9Y561 859 aa5.18□□□□□ -1.58
PHC3-213ENST00000491258 RB1CC1Q8TDY2 1594 aa5.17□□□□□ -1.58
PHC3-213ENST00000491258 A1L4Q6 167 aa5.17□□□□□ -1.58
PHC3-213ENST00000491258 H7C1Q1 480 aa5.17□□□□□ -1.58
PHC3-213ENST00000491258 DCLK1O15075 740 aa5.17□□□□□ -1.58
PHC3-213ENST00000491258 USP1O94782 785 aa5.17□□□□□ -1.58
PHC3-213ENST00000491258 FGBP02675 491 aa5.17□□□□□ -1.58
PHC3-213ENST00000491258 AHSGP02765 367 aa5.17□□□□□ -1.58
PHC3-213ENST00000491258 ATXN1LP0C7T5 689 aaKnown RBP5.17□□□□□ -1.58
PHC3-213ENST00000491258 PIM1P11309 404 aaPredicted RBP5.17□□□□□ -1.58
PHC3-213ENST00000491258 SCP2P22307 547 aa5.17□□□□□ -1.58
PHC3-213ENST00000491258 PPIFP30405 207 aaKnown RBP5.17□□□□□ -1.58
PHC3-213ENST00000491258 CCKARP32238 428 aa5.17□□□□□ -1.58
PHC3-213ENST00000491258 PXNP49023 591 aaPredicted RBP5.17□□□□□ -1.58
PHC3-213ENST00000491258 ADKP55263 362 aaKnown RBP5.17□□□□□ -1.58
PHC3-213ENST00000491258 NOGQ13253 232 aa5.17□□□□□ -1.58
PHC3-213ENST00000491258 TBC1D25Q3MII6 688 aa5.17□□□□□ -1.58
PHC3-213ENST00000491258 RGS7BPQ6MZT1 257 aaPredicted RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms