RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 CLUHO75153 1309 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 C2orf71A6NGG8 1288 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 MAGEC1O60732 1142 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 KRT10P13645 584 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 NSFP46459 744 aaKnown RBP20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 CPA2P48052 419 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 NFX1Q12986 1120 aaKnown RBP20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 TFDP1Q14186 410 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 SNRNP35Q16560 246 aaKnown RBP20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 LIN52Q52LA3 116 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 ADGRD1Q6QNK2 874 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 FBXL13Q8NEE6 735 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 PAFAH2Q99487 392 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 RAB20Q9NX57 234 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 ARMCX1Q9P291 453 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 NFASCO94856 1347 aa20.3■□□□□ 0.84
SNAPC3-206ENST00000490969 CREB3O43889 395 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 PIAS1O75925 651 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 CDK7P50613 346 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 ARL4CP56559 192 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 UBXN2AP68543 259 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 SDCCAG8Q86SQ7 713 aaPredicted RBP20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 CCDC110Q8TBZ0 833 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 ALKBH8Q96BT7 664 aaKnown RBP20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 FNBP1Q96RU3 617 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 CENPKQ9BS16 269 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 WDR11Q9BZH6 1224 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 PHACTR1Q9C0D0 580 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 SBF1O95248 1867 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 PI4K2BG5E9Z4 385 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 LGR5O75473 907 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 SSTR1P30872 391 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 ANGEL2Q5VTE6 544 aaKnown RBP20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 FAM91A1Q658Y4 838 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 DRICH1Q6PGQ1 229 aaPredicted RBP20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 HAUS6Q7Z4H7 955 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 ZNF577Q9BSK1 485 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 DHRS4Q9BTZ2 278 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 NMUR2Q9GZQ4 415 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 OCEL1Q9H607 264 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 TOPORSQ9NS56 1045 aaPredicted RBP20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 PRR12Q9ULL5 1215 aa20.29■□□□□ 0.84
SNAPC3-206ENST00000490969 LOXHD1Q8IVV2 1947 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 B2RBV5 119 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 GOLGA8SH3BPF8 625 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 GOLGA8MH3BSY2 632 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 MYL2P10916 166 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 YBX3P16989 372 aaKnown RBP eCLIP20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 GLRA2P23416 452 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 PHBP35232 272 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 PRKD1Q15139 912 aaPredicted RBP20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 MON1BQ7L1V2 547 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 NET1Q7Z628 596 aaPredicted RBP20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 NLRX1Q86UT6 975 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 SMC1BQ8NDV3 1235 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 H3BRJ5 948 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 CRABP2P29373 138 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 HIF1AQ16665 826 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 TMPRSS6Q8IU80 811 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 HAPLN3Q96S86 360 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 ZWILCHQ9H900 591 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 NDE1Q9NXR1 346 aa20.28■□□□□ 0.84
SNAPC3-206ENST00000490969 DENND3A2RUS2 1198 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 CFBP00751 764 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 ATF7P17544 494 aaPredicted RBP20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 MCCD1P59942 119 aaPredicted RBP20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 GTF2BQ00403 316 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 RIPOR1Q6ZS17 1223 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 CHSY1Q86X52 802 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 ATP11CQ8NB49 1132 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 SPIRE2Q8WWL2 714 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 IL1RAPL1Q9NZN1 696 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 LMCD1Q9NZU5 365 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 DDNO94850 711 aaPredicted RBP20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 ARP10275 920 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 CDC16Q13042 620 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 TRMT5Q32P41 509 aaKnown RBP20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 ATP13A4Q4VNC1 1196 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 PABPC1LQ4VXU2 614 aaKnown RBP20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 CEP55Q53EZ4 464 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 MYLK4Q86YV6 388 aaPredicted RBP20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 SCUBE1Q8IWY4 988 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 FBXO27Q8NI29 283 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 PYROXD1Q8WU10 500 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 C11orf70Q9BRQ4 267 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 SYT17Q9BSW7 474 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 ACSS3Q9H6R3 686 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 COMMD3-BMI1R4GMX3 469 aa20.27■□□□□ 0.84
SNAPC3-206ENST00000490969 LPXNO60711 386 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 CIB2O75838 187 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 DHRS4L1P0CG22 281 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 BGNP21810 368 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 ERFP50548 548 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 SNRPFP62306 86 aaKnown RBP20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 AP2B1P63010 937 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 KLHL38Q2WGJ6 581 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 LIN9Q5TKA1 542 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 ALYREFQ86V81 257 aaKnown RBP20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 DCAKDQ8WVC6 231 aa20.26■□□□□ 0.83
SNAPC3-206ENST00000490969 PANX3Q96QZ0 392 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms