RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 ZCCHC9Q8N567 271 aaKnown RBP16.52■□□□□ 0.24
BRD9-208ENST00000489816 C1orf127Q8N9H9 656 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 SGSM3Q96HU1 749 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 CDT1Q9H211 546 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 KDM4CQ9H3R0 1056 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 TRABDQ9H4I3 376 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 SIX4Q9UIU6 781 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 ARID2Q68CP9 1835 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 M0QYV0 167 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 AVILO75366 819 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 VCPP55072 806 aaKnown RBP16.52■□□□□ 0.24
BRD9-208ENST00000489816 IER5Q5VY09 327 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 JADE1Q6IE81 842 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 CGB2Q6NT52 195 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 SYDE1Q6ZW31 735 aaPredicted RBP16.52■□□□□ 0.24
BRD9-208ENST00000489816 CROCCP2Q86T23 111 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 NETO2Q8NC67 525 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 CKAP2Q8WWK9 683 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 RSAD2Q8WXG1 361 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 ANKRD36BP1Q96IX9 119 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 ECT2Q9H8V3 914 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 RPF1Q9H9Y2 349 aaKnown RBP16.52■□□□□ 0.24
BRD9-208ENST00000489816 GRID1Q9ULK0 1009 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 AKT3Q9Y243 479 aa16.52■□□□□ 0.24
BRD9-208ENST00000489816 SSC5DA1L4H1 1573 aa16.52■□□□□ 0.23
BRD9-208ENST00000489816 MGAT5Q09328 741 aa16.52■□□□□ 0.23
BRD9-208ENST00000489816 EAPPQ56P03 285 aaPredicted RBP16.52■□□□□ 0.23
BRD9-208ENST00000489816 C1orf228Q6PIY5 440 aa16.52■□□□□ 0.23
BRD9-208ENST00000489816 LBHD1Q9BQE6 289 aaPredicted RBP16.52■□□□□ 0.23
BRD9-208ENST00000489816 CNTN6Q9UQ52 1028 aa16.52■□□□□ 0.23
BRD9-208ENST00000489816 SUN1O94901 812 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 EFNA5P52803 228 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 CAV1Q03135 178 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 SLC1A5Q15758 541 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 SNCBQ16143 134 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 AMHR2Q16671 573 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 FAM102AQ5T9C2 384 aaPredicted RBP16.51■□□□□ 0.23
BRD9-208ENST00000489816 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.51■□□□□ 0.237e-6■□□□□ 10.8
BRD9-208ENST00000489816 RIOX2Q8IUF8 465 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 ABLIM1O14639 778 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 RPSAP08865 295 aaKnown RBP16.51■□□□□ 0.23
BRD9-208ENST00000489816 ZNF286BP0CG31 522 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 CYP2C8P10632 490 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 KRT4P19013 534 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 ATP5DP30049 168 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 RDXP35241 583 aaKnown RBP16.51■□□□□ 0.23
BRD9-208ENST00000489816 ELF3P78545 371 aaPredicted RBP16.51■□□□□ 0.23
BRD9-208ENST00000489816 MPZL3Q6UWV2 235 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 C3orf62Q6ZUJ4 267 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 PYROXD1Q8WU10 500 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 MAML1Q92585 1016 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 CFAP57Q96MR6 1250 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 MAGEB5Q9BZ81 275 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 KCNG1Q9UIX4 513 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 NR2E3Q9Y5X4 410 aa16.51■□□□□ 0.23
BRD9-208ENST00000489816 TCRBV5S1A1TA0A578 114 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 TAC1P20366 129 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 MIPP30301 263 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 POLR2BP30876 1174 aaKnown RBP16.5■□□□□ 0.23
BRD9-208ENST00000489816 RAD23BP54727 409 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 PIGHQ14442 188 aaPredicted RBP16.5■□□□□ 0.23
BRD9-208ENST00000489816 STAT4Q14765 748 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 OASLQ15646 514 aaKnown RBP16.5■□□□□ 0.23
BRD9-208ENST00000489816 HIF1AQ16665 826 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 SUGP1Q8IWZ8 645 aaKnown RBP16.5■□□□□ 0.23
BRD9-208ENST00000489816 ELOVL4Q9GZR5 314 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 CHMP2BQ9UQN3 213 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 HEY1Q9Y5J3 304 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 FAM47DPA6NHR8 397 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 IGF2BP3O00425 579 aaKnown RBP eCLIP16.5■□□□□ 0.23
BRD9-208ENST00000489816 SOCS7O14512 581 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 STAG3L1P0CL83 205 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 OVGP1Q12889 678 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 ARHGEF18Q6ZSZ5 1173 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 SULF1Q8IWU6 871 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 KIRREL3Q8IZU9 778 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 UBR7Q8N806 425 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 KLHL29Q96CT2 875 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 MAK16Q9BXY0 300 aaKnown RBP16.5■□□□□ 0.23
BRD9-208ENST00000489816 FAM49BQ9NUQ9 324 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 HCRTO43612 131 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 INSRRP14616 1297 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 RPL22P35268 128 aaKnown RBP16.5■□□□□ 0.23
BRD9-208ENST00000489816 GPX6P59796 221 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 MCL1Q07820 350 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 KCTD2Q14681 263 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 LACTB2Q53H82 288 aaPredicted RBP16.5■□□□□ 0.23
BRD9-208ENST00000489816 RNASEH2BQ5TBB1 312 aaKnown RBP16.5■□□□□ 0.23
BRD9-208ENST00000489816 MAP1SQ66K74 1059 aaPredicted RBP16.5■□□□□ 0.23
BRD9-208ENST00000489816 TMEM237Q96Q45 408 aa16.5■□□□□ 0.23
BRD9-208ENST00000489816 RBP3P10745 1247 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 MXD4Q14582 209 aaPredicted RBP16.49■□□□□ 0.23
BRD9-208ENST00000489816 ITIH4Q14624 930 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 CELF3Q5SZQ8 465 aaKnown RBP16.49■□□□□ 0.23
BRD9-208ENST00000489816 OR6B2Q6IFH4 312 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 TRABD2AQ86V40 505 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 SPATA18Q8TC71 538 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 TRIM56Q9BRZ2 755 aaKnown RBP16.49■□□□□ 0.23
BRD9-208ENST00000489816 DCTN4Q9UJW0 460 aa16.49■□□□□ 0.23
BRD9-208ENST00000489816 ACKR2O00590 384 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms