RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 C2CD6Q53TS8 623 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 FUT10Q6P4F1 479 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 ANKRD52Q8NB46 1076 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 KIF18AQ8NI77 898 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 GPR62Q9BZJ7 368 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 OSGEPQ9NPF4 335 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 UVRAGQ9P2Y5 699 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 PCDHGC5Q9Y5F6 944 aa22.1■■□□□ 1.13
SND1-214ENST00000489417 MTA2O94776 668 aa22.09■■□□□ 1.13
SND1-214ENST00000489417 HADHBP55084 474 aaKnown RBP22.09■■□□□ 1.13
SND1-214ENST00000489417 PDCLQ13371 301 aa22.09■■□□□ 1.13
SND1-214ENST00000489417 CCDC142Q17RM4 750 aa22.09■■□□□ 1.13
SND1-214ENST00000489417 PTPN20Q4JDL3 420 aa22.09■■□□□ 1.13
SND1-214ENST00000489417 INTS6LQ5JSJ4 861 aaKnown RBP22.09■■□□□ 1.13
SND1-214ENST00000489417 SPOUT1Q5T280 376 aaKnown RBP22.09■■□□□ 1.13
SND1-214ENST00000489417 FAM171A1Q5VUB5 890 aa22.09■■□□□ 1.13
SND1-214ENST00000489417 FUKQ8N0W3 1084 aa22.09■■□□□ 1.13
SND1-214ENST00000489417 TPCN2Q8NHX9 752 aa22.09■■□□□ 1.13
SND1-214ENST00000489417 BCL7CQ8WUZ0 217 aaPredicted RBP22.09■■□□□ 1.13
SND1-214ENST00000489417 CALR3Q96L12 384 aaKnown RBP22.09■■□□□ 1.13
SND1-214ENST00000489417 YME1L1Q96TA2 773 aa22.09■■□□□ 1.13
SND1-214ENST00000489417 LBHD1Q9BQE6 289 aaPredicted RBP22.09■■□□□ 1.13
SND1-214ENST00000489417 NUP85Q9BW27 656 aa22.09■■□□□ 1.13
SND1-214ENST00000489417 COG5Q9UP83 839 aa22.09■■□□□ 1.13
SND1-214ENST00000489417 MYBPHLA2RUH7 354 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 GRID2IPA4D2P6 1211 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 FANCGO15287 622 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 PALMO75781 387 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 OAZ2O95190 189 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 FGFR3P22607 806 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 TSPY1Q01534 308 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 BST2Q10589 180 aaKnown RBP22.08■■□□□ 1.13
SND1-214ENST00000489417 COL13A1Q5TAT6 717 aaPredicted RBP22.08■■□□□ 1.13
SND1-214ENST00000489417 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.08■■□□□ 1.13
SND1-214ENST00000489417 TMEM173Q86WV6 379 aaPredicted RBP22.08■■□□□ 1.13
SND1-214ENST00000489417 OR10T2Q8NGX3 314 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 MYCBPAPQ8TBZ2 947 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 ZNF564Q8TBZ8 553 aaPredicted RBP22.08■■□□□ 1.13
SND1-214ENST00000489417 HERVK_113Q902F9 699 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 DPF3Q92784 378 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 ZNF558Q96NG5 402 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 CPXM1Q96SM3 734 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 MED10Q9BTT4 135 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 B3GNT5Q9BYG0 378 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 STRIP2Q9ULQ0 834 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 MRPL42Q9Y6G3 142 aaKnown RBP22.08■■□□□ 1.13
SND1-214ENST00000489417 PTPRSQ13332 1948 aa22.08■■□□□ 1.13
SND1-214ENST00000489417 LAG3P18627 525 aa22.07■■□□□ 1.12
SND1-214ENST00000489417 PLCB3Q01970 1234 aa22.07■■□□□ 1.12
SND1-214ENST00000489417 PDE4CQ08493 712 aa22.07■■□□□ 1.12
SND1-214ENST00000489417 VARS2Q5ST30 1063 aaKnown RBP22.07■■□□□ 1.12
SND1-214ENST00000489417 PLEKHA7Q6IQ23 1121 aa22.07■■□□□ 1.12
SND1-214ENST00000489417 LLGL2Q6P1M3 1020 aa22.07■■□□□ 1.12
SND1-214ENST00000489417 FAM171BQ6P995 826 aa22.07■■□□□ 1.12
SND1-214ENST00000489417 KCNT2Q6UVM3 1135 aa22.07■■□□□ 1.12
SND1-214ENST00000489417 PHLDB2Q86SQ0 1253 aa22.07■■□□□ 1.12
SND1-214ENST00000489417 IPO4Q8TEX9 1081 aaKnown RBP22.07■■□□□ 1.12
SND1-214ENST00000489417 PKMYT1Q99640 499 aa22.07■■□□□ 1.12
SND1-214ENST00000489417 NAPGQ99747 312 aaPredicted RBP22.07■■□□□ 1.12
SND1-214ENST00000489417 SYNCQ9H7C4 482 aa22.07■■□□□ 1.12
SND1-214ENST00000489417 CXXC1Q9P0U4 656 aaPredicted RBP22.07■■□□□ 1.12
SND1-214ENST00000489417 CHORDC1Q9UHD1 332 aaPredicted RBP22.07■■□□□ 1.12
SND1-214ENST00000489417 SCINQ9Y6U3 715 aa22.07■■□□□ 1.12
SND1-214ENST00000489417 CTAGE9A4FU28 777 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 CARNS1A5YM72 827 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 CLDN5O00501 218 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 CAPN15O75808 1086 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 GJB5O95377 273 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 HTRA4P83105 476 aaPredicted RBP22.06■■□□□ 1.12
SND1-214ENST00000489417 CYP4A22Q5TCH4 519 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 PAQR9Q6ZVX9 377 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 FAM35AQ86V20 835 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 CEP57Q86XR8 500 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 STK32AQ8WU08 396 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 SLC35F5Q8WV83 523 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 MYLPFQ96A32 169 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 C18orf8Q96DM3 657 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 PCED1BQ96HM7 432 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 IGSF21Q96ID5 467 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 TMEM209Q96SK2 561 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 MIS12Q9H081 205 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 MRPL47Q9HD33 250 aaKnown RBP22.06■■□□□ 1.12
SND1-214ENST00000489417 CCDC85CA6NKD9 419 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 TULP2O00295 520 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 ERBB2P04626 1255 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 GABRB2P47870 512 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 RGS7P49802 495 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 GSCP56915 257 aaPredicted RBP22.06■■□□□ 1.12
SND1-214ENST00000489417 SLC8A3P57103 927 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 MRPL58Q14197 206 aaKnown RBP22.06■■□□□ 1.12
SND1-214ENST00000489417 MAPRE1Q15691 268 aaKnown RBP22.06■■□□□ 1.12
SND1-214ENST00000489417 SLC39A11Q8N1S5 342 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 LRRC57Q8N9N7 239 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 COLGALT1Q8NBJ5 622 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 SLC9A7Q96T83 725 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 DUSP16Q9BY84 665 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 MTIF3Q9H2K0 278 aaKnown RBP22.06■■□□□ 1.12
SND1-214ENST00000489417 ST7Q9NRC1 585 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 PARVAQ9NVD7 372 aa22.06■■□□□ 1.12
SND1-214ENST00000489417 WDR35Q9P2L0 1181 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms