RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ATP5JP18859 108 aa8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 RBMS1P29558 406 aaKnown RBP8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 OPRD1P41143 372 aa8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 KIR2DL1P43626 348 aaPredicted RBP8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 AFF3P51826 1226 aaKnown RBP8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 ARHGAP15Q53QZ3 475 aa8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 CDCP2Q5VXM1 449 aa8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 SWSAP1Q6NVH7 229 aa8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 USP17L6PQ6QN14 398 aa8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 GATAD2AQ86YP4 633 aa8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 PDCD6IPQ8WUM4 868 aaKnown RBP8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 WNT2BQ93097 391 aa8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 EIF2AQ9BY44 585 aaKnown RBP8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 ANKRD6Q9Y2G4 727 aa8.29□□□□□ -1.08
EXOSC3-206ENST00000489414 NSD1Q96L73 2696 aaPredicted RBP8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 SHANK1Q9Y566 2161 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 PIK3CDO00329 1044 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 MEIS1O00470 390 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 MEIS2O14770 477 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 FOXP2O15409 715 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 NCAM1P13591 858 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 POLE2P56282 527 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 CYP4A11Q02928 519 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 TRAF1Q13077 416 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 NOLC1Q14978 699 aaKnown RBP eCLIP8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 DCAF12L1Q5VU92 463 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 CC2D1AQ6P1N0 951 aaPredicted RBP8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 SV2AQ7L0J3 742 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 CLEC14AQ86T13 490 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 HEATR4Q86WZ0 1026 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 ERC1Q8IUD2 1116 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 CADM4Q8NFZ8 388 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 USP13Q92995 863 aaPredicted RBP8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 TCTN2Q96GX1 697 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 IFT122Q9HBG6 1241 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 ZDHHC4Q9NPG8 344 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 CASS4Q9NQ75 786 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 ZBTB40Q9NUA8 1239 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 TJP2Q9UDY2 1190 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 MAFFQ9ULX9 164 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 SATB2Q9UPW6 733 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 YIPF1Q9Y548 306 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 SLCO1B1Q9Y6L6 691 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 DENND4CQ5VZ89 1909 aa8.28□□□□□ -1.08
EXOSC3-206ENST00000489414 A0A1B0GTQ1 180 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 LAD1O00515 517 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 NOBOXO60393 691 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 CKMT2P17540 419 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 IGFBP6P24592 240 aaPredicted RBP8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 ACP1P24666 158 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 GABRR2P28476 465 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 CD6P30203 668 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 ARPP19P56211 112 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 CYP4F2P78329 520 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 CYP4F8P98187 520 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 E2F1Q01094 437 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 EMC10Q5UCC4 262 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 MIS18BP1Q6P0N0 1132 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 CMTM8Q8IZV2 173 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 STAG2Q8N3U4 1231 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 ATP2A3Q93084 1043 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 PRR11Q96HE9 360 aaPredicted RBP8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 ACAP3Q96P50 834 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 IPO9Q96P70 1041 aaKnown RBP8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 DEPDC7Q96QD5 511 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 SLC46A2Q9BY10 475 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 UPF2Q9HAU5 1272 aaKnown RBP8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 CD248Q9HCU0 757 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 ZNF71Q9NQZ8 489 aaPredicted RBP8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 TOMM22Q9NS69 142 aa8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 DAXXQ9UER7 740 aaPredicted RBP8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 AFF4Q9UHB7 1163 aaKnown RBP8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 EIF2B4Q9UI10 523 aaKnown RBP8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 ERRFI1Q9UJM3 462 aaPredicted RBP8.27□□□□□ -1.09
EXOSC3-206ENST00000489414 KIF26BQ2KJY2 2108 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 TMEM189-UBE2V1I3L0A0 370 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 ZNF213O14771 459 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 DFNA5O60443 496 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 CSO75390 466 aaKnown RBP8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 FGF19O95750 216 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 C4BPAP04003 597 aaKnown RBP8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 KIF5BP33176 963 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 CTSKP43235 329 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 GRIA4P48058 902 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 MESP2Q0VG99 397 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 SART3Q15020 963 aaKnown RBP8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 INF2Q27J81 1249 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 SLC35G1Q2M3R5 365 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 GAB4Q2WGN9 574 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 C3orf38Q5JPI3 329 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 KCNT1Q5JUK3 1230 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 DGKHQ86XP1 1220 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 PRIMA1Q86XR5 153 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 HOMER1Q86YM7 354 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 EID2Q8N6I1 236 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 SAP25Q8TEE9 199 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 OSCP1Q8WVF1 389 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 FAM167AQ96KS9 214 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 TMUB1Q9BVT8 246 aa8.26□□□□□ -1.09
EXOSC3-206ENST00000489414 NXF3Q9H4D5 531 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms