RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 FAM200AQ8TCP9 573 aa13.25□□□□□ -0.29
COL4A5-206ENST00000489230 SMG7Q92540 1137 aaKnown RBP13.25□□□□□ -0.29
COL4A5-206ENST00000489230 VPS16Q9H269 839 aa13.25□□□□□ -0.29
COL4A5-206ENST00000489230 UBE2TQ9NPD8 197 aaPredicted RBP13.25□□□□□ -0.29
COL4A5-206ENST00000489230 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.25□□□□□ -0.29
COL4A5-206ENST00000489230 CISHQ9NSE2 258 aa13.25□□□□□ -0.29
COL4A5-206ENST00000489230 EHD2Q9NZN4 543 aa13.25□□□□□ -0.29
COL4A5-206ENST00000489230 GCNT4Q9P109 453 aa13.25□□□□□ -0.29
COL4A5-206ENST00000489230 SLC27A5Q9Y2P5 690 aa13.25□□□□□ -0.29
COL4A5-206ENST00000489230 DAAM1Q9Y4D1 1078 aa13.25□□□□□ -0.29
COL4A5-206ENST00000489230 INSL5Q9Y5Q6 135 aa13.25□□□□□ -0.29
COL4A5-206ENST00000489230 MBTPS2O43462 519 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 CILPO75339 1184 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 SEC24AO95486 1093 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 FGF19O95750 216 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 HAPLN1P10915 354 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-206ENST00000489230 CD58P19256 250 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 PON1P27169 355 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 COPB1P53618 953 aaKnown RBP13.24□□□□□ -0.29
COL4A5-206ENST00000489230 ZNF445P59923 1031 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 CYP27A1Q02318 531 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 VEPH1Q14D04 833 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 SMAD2Q15796 467 aaKnown RBP13.24□□□□□ -0.29
COL4A5-206ENST00000489230 TAF12Q16514 161 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 MGAT5BQ3V5L5 792 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 CYP4A22Q5TCH4 519 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 TRIM65Q6PJ69 517 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 C12orf76Q8N812 135 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-206ENST00000489230 TMEM176AQ96HP8 235 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 HEXIM2Q96MH2 286 aaKnown RBP13.24□□□□□ -0.29
COL4A5-206ENST00000489230 PGLYRP2Q96PD5 576 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 TMEM209Q96SK2 561 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 PKMYT1Q99640 499 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 CRACR2AQ9BSW2 395 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 ELOVL4Q9GZR5 314 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 SDCBP2Q9H190 292 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 CBX8Q9HC52 389 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 ABI2Q9NYB9 513 aaPredicted RBP13.24□□□□□ -0.29
COL4A5-206ENST00000489230 TAB2Q9NYJ8 693 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 APEX2Q9UBZ4 518 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 MUTYHQ9UIF7 546 aa13.24□□□□□ -0.29
COL4A5-206ENST00000489230 VWA8A3KMH1 1905 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 ZNF197O14709 1029 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 TRIM66O15016 1216 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 ATP2C2O75185 946 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 LRRN2O75325 713 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 RFPL2O75678 378 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 SLC9A1P19634 815 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 RFX1P22670 979 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 GRIK1P39086 918 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 RAP1GAPP47736 663 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 SLC8A3P57103 927 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 UBXN1Q04323 297 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 CBX2Q14781 532 aaPredicted RBP13.23□□□□□ -0.29
COL4A5-206ENST00000489230 MDH1BQ5I0G3 518 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 PHLDB3Q6NSJ2 640 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 RRAGAQ7L523 313 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 ACOT1Q86TX2 421 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 SUSD6Q92537 303 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 PCED1BQ96HM7 432 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 SEPT5Q99719 369 aaPredicted RBP13.23□□□□□ -0.29
COL4A5-206ENST00000489230 PLCB1Q9NQ66 1216 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 CRTAC1Q9NQ79 661 aa13.23□□□□□ -0.29
COL4A5-206ENST00000489230 AVENQ9NQS1 362 aaPredicted RBP13.23□□□□□ -0.29
COL4A5-206ENST00000489230 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL4A5-206ENST00000489230 USP15Q9Y4E8 981 aaPredicted RBP13.23□□□□□ -0.29
COL4A5-206ENST00000489230 CCL16O15467 120 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 MICAL2O94851 1124 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 SERPINC1P01008 464 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 PAEPP09466 180 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 CYP2F1P24903 491 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 ANXA13P27216 316 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 PSMC1P62191 440 aaKnown RBP13.22□□□□□ -0.29
COL4A5-206ENST00000489230 TWF1Q12792 350 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 STILQ15468 1287 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 DNAJB7Q7Z6W7 309 aaPredicted RBP13.22□□□□□ -0.29
COL4A5-206ENST00000489230 MYLPFQ96A32 169 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 ELMO3Q96BJ8 720 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 ZNF707Q96C28 371 aaPredicted RBP13.22□□□□□ -0.29
COL4A5-206ENST00000489230 CYFIP2Q96F07 1278 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 SPATA17Q96L03 361 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 C8orf48Q96LL4 319 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 HNRNPABQ99729 332 aaKnown RBP13.22□□□□□ -0.29
COL4A5-206ENST00000489230 MED10Q9BTT4 135 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 APOL5Q9BWW9 433 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 PHF7Q9BWX1 381 aaPredicted RBP13.22□□□□□ -0.29
COL4A5-206ENST00000489230 HSD3B7Q9H2F3 369 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 WDR6Q9NNW5 1121 aaKnown RBP13.22□□□□□ -0.29
COL4A5-206ENST00000489230 TMLHEQ9NVH6 421 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 NR2E1Q9Y466 385 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 PCDHB4Q9Y5E5 795 aa13.22□□□□□ -0.29
COL4A5-206ENST00000489230 ZFP37Q9Y6Q3 630 aaPredicted RBP13.22□□□□□ -0.29
COL4A5-206ENST00000489230 LGALS16A8MUM7 142 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 VNN2O95498 520 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 TPM3P06753 285 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 CSH1P0DML2 217 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 CSH2P0DML3 217 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 VDRP11473 427 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 BDNFP23560 247 aa13.21□□□□□ -0.29
COL4A5-206ENST00000489230 RAD23BP54727 409 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms