RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CSE1LP55060 971 aaKnown RBP18.31■□□□□ 0.52
NPHP4-209ENST00000489180 C11orf74Q86VG3 221 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 OTUB1Q96FW1 271 aaPredicted RBP18.31■□□□□ 0.52
NPHP4-209ENST00000489180 CDC42EP4Q9H3Q1 356 aaKnown RBP18.31■□□□□ 0.52
NPHP4-209ENST00000489180 GLI1P08151 1106 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 MRPL28Q13084 256 aaKnown RBP18.31■□□□□ 0.52
NPHP4-209ENST00000489180 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 HORMAD1Q86X24 394 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 GPATCH2LQ9NWQ4 482 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 GID8Q9NWU2 228 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 DTNAQ9Y4J8 743 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 KDM6AO15550 1401 aaPredicted RBP18.31■□□□□ 0.52
NPHP4-209ENST00000489180 NME5P56597 212 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 HHIPL2Q6UWX4 724 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 SLC20A1Q8WUM9 679 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 DTNBP1Q96EV8 351 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 DYRK4Q9NR20 520 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 CHRM3P20309 590 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 ZRANB3Q5FWF4 1079 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 PTRHD1Q6GMV3 140 aaKnown RBP18.31■□□□□ 0.52
NPHP4-209ENST00000489180 ZNF571Q7Z3V5 609 aaPredicted RBP18.31■□□□□ 0.52
NPHP4-209ENST00000489180 CRAMP1Q96RY5 1269 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 FUCA2Q9BTY2 467 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 ZNF556Q9HAH1 456 aa18.31■□□□□ 0.52
NPHP4-209ENST00000489180 RHOBTB1O94844 696 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 TFE3P19532 575 aaPredicted RBP18.3■□□□□ 0.52
NPHP4-209ENST00000489180 C11orf63Q6NUN7 778 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 TTC33Q6PID6 262 aaPredicted RBP18.3■□□□□ 0.52
NPHP4-209ENST00000489180 M0R3G1 203 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 SMAPO00193 183 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 PMPCBO75439 489 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 KRT8P05787 483 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 AARS2Q5JTZ9 985 aaKnown RBP18.3■□□□□ 0.52
NPHP4-209ENST00000489180 FBXO25Q8TCJ0 367 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 PRPF18Q99633 342 aaKnown RBP18.3■□□□□ 0.52
NPHP4-209ENST00000489180 KCTD10Q9H3F6 313 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 BLOC1S6Q9UL45 172 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 ENTPD3O75355 529 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 ARIH2O95376 493 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 TGM2P21980 687 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 ACADSBP45954 432 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 CYLC2Q14093 348 aaPredicted RBP18.3■□□□□ 0.52
NPHP4-209ENST00000489180 ACBD5Q5T8D3 534 aaPredicted RBP18.3■□□□□ 0.52
NPHP4-209ENST00000489180 MTDHQ86UE4 582 aaKnown RBP18.3■□□□□ 0.52
NPHP4-209ENST00000489180 ZNF786Q8N393 782 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 TMCO5AQ8N6Q1 288 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 CALML6Q8TD86 181 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 CBWD1Q9BRT8 395 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 ARHGAP20Q9P2F6 1191 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 SNRPFP62306 86 aaKnown RBP18.3■□□□□ 0.52
NPHP4-209ENST00000489180 VPS33BQ9H267 617 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 RHBDL2Q9NX52 303 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 GH1P01241 217 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 CD4P01730 458 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 CYP11B1P15538 503 aa18.3■□□□□ 0.52
NPHP4-209ENST00000489180 CCDC92Q53HC0 331 aaPredicted RBP18.3■□□□□ 0.52
NPHP4-209ENST00000489180 CNOT7Q9UIV1 285 aaKnown RBP18.3■□□□□ 0.52
NPHP4-209ENST00000489180 GLRBP48167 497 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 SV2CQ496J9 727 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 ABHD8Q96I13 439 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 TMEM121Q9BTD3 319 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 CATSPERBQ9H7T0 1116 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 OLFML3Q9NRN5 406 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 ZNRF3Q9ULT6 936 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 UNC13BO14795 1591 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 NCOA3Q9Y6Q9 1424 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 GLRA4Q5JXX5 417 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 RBM43Q6ZSC3 357 aaKnown RBP18.29■□□□□ 0.52
NPHP4-209ENST00000489180 SPIRE2Q8WWL2 714 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 DDX50Q9BQ39 737 aaKnown RBP18.29■□□□□ 0.52
NPHP4-209ENST00000489180 MTMR12Q9C0I1 747 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 RPS6KL1Q9Y6S9 549 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 MAGEA13PA6NCF6 341 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 RAP1GAPP47736 663 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 GIT2Q14161 759 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 EFHC1Q5JVL4 640 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 ZNF467Q7Z7K2 595 aaPredicted RBP18.29■□□□□ 0.52
NPHP4-209ENST00000489180 KLK14Q9P0G3 267 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 OTUD4Q01804 1114 aaKnown RBP18.29■□□□□ 0.52
NPHP4-209ENST00000489180 SLC47A2Q86VL8 602 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 ATG4CQ96DT6 458 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 FAM129AQ9BZQ8 928 aa18.29■□□□□ 0.52
NPHP4-209ENST00000489180 STK25O00506 426 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 ACADSP16219 412 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 NAPEPLDQ6IQ20 393 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 CCDC60Q8IWA6 550 aaPredicted RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 ILKAPQ9H0C8 392 aaPredicted RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 RUVBL2Q9Y230 463 aaKnown RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 TRAPPC3O43617 180 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 CLASP2O75122 1294 aaKnown RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 ITGA4P13612 1032 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 EPHB2P29323 1055 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 WLSQ5T9L3 541 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 SETD3Q86TU7 594 aaPredicted RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 ACTRT1Q8TDG2 376 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 ANKEF1Q9NU02 776 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 M0QYT0 321 aa18.28■□□□□ 0.52
NPHP4-209ENST00000489180 TCF7P36402 384 aaPredicted RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 CLK1P49759 484 aaKnown RBP18.28■□□□□ 0.52
NPHP4-209ENST00000489180 AQP5P55064 265 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms