RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 EIF4BP23588 611 aaKnown RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 GCKP35557 465 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 MARCKSL1P49006 195 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 OSTNP61366 133 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 ITGA7Q13683 1181 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 ZKSCAN8Q15776 578 aaPredicted RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 LONRF1Q17RB8 773 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 DCAF4L1Q3SXM0 396 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 ZBTB41Q5SVQ8 909 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 LMBRD2Q68DH5 695 aaPredicted RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 KRT39Q6A163 491 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 CCDC137Q6PK04 289 aaKnown RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 PALB2Q86YC2 1186 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 SH3TC2Q8TF17 1288 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 KRT35Q92764 455 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 TMEM8AQ9HCN3 771 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 PAK6Q9NQU5 681 aaPredicted RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 TOPORSQ9NS56 1045 aaPredicted RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 HOMER3Q9NSC5 361 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 PARP2Q9UGN5 583 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 PHF24Q9UPV7 400 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 PCDHA3Q9Y5H8 950 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 RALGAPA2Q2PPJ7 1873 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 FOXO6A8MYZ6 492 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 KBTBD13C9JR72 458 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 PODXLO00592 558 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 FAM189A1O60320 539 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 RARGP13631 454 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 ARF4P18085 180 aaPredicted RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 CTNNA2P26232 953 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 TNFSF9P41273 254 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 MSH2P43246 934 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 IRX1P78414 480 aaPredicted RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 MRPS6P82932 125 aaKnown RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 PTK7Q13308 1070 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 SLMAPQ14BN4 828 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 CLUL1Q15846 466 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 ARHGAP44Q17R89 818 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 EEF1DP3Q658K8 133 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 NUGGCQ68CJ6 796 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 SMYD5Q6GMV2 418 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 GDF6Q6KF10 455 aaPredicted RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 CATSPER4Q7RTX7 472 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 ANKRD42Q8N9B4 389 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 ART4Q93070 314 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 SYT11Q9BT88 431 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 DDX23Q9BUQ8 820 aaKnown RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 GPR88Q9GZN0 384 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 TMEM117Q9H0C3 514 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 ARHGEF3Q9NR81 526 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 PCYOX1Q9UHG3 505 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 CPSF3Q9UKF6 684 aaKnown RBP9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 COQ4Q9Y3A0 265 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 TRPV2Q9Y5S1 764 aa9.52□□□□□ -0.89
EXOSC1-211ENST00000489158 TMEM120BA0PK00 339 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 ANKRD62A6NC57 917 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 HGSO14964 777 aaPredicted RBP9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 SMNDC1O75940 238 aaKnown RBP eCLIP9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 IL18RAPO95256 599 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 GBP1P32455 592 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 SNX17Q15036 470 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 C1orf220Q5T0J3 134 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 CAPRIN2Q6IMN6 1127 aaKnown RBP9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 MFSD5Q6N075 450 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 NOTUMQ6P988 496 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 VSTM1Q6UX27 236 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 SPATA21Q7Z572 469 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 FITM2Q8N6M3 262 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 UBL4BQ8N7F7 174 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 CEP120Q8N960 986 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 SLC43A3Q8NBI5 491 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 ARMC2Q8NEN0 867 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 GDAP1Q8TB36 358 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 MICAL1Q8TDZ2 1067 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 ARHGEF2Q92974 986 aaKnown RBP9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 FAM81BQ96LP2 452 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 CGRRF1Q99675 332 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 ROPN1BQ9BZX4 212 aaPredicted RBP9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 INTS2Q9H0H0 1204 aaKnown RBP9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 CDT1Q9H211 546 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 PDZD7Q9H5P4 517 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 KIF9Q9HAQ2 790 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 ROPN1Q9HAT0 212 aaPredicted RBP9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 CDHR5Q9HBB8 845 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 KCNK9Q9NPC2 374 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 ADAM22Q9P0K1 906 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 NOD1Q9Y239 953 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 ARL2BPQ9Y2Y0 163 aa9.51□□□□□ -0.89
EXOSC1-211ENST00000489158 TCRBV7S2A1N4TA0A589 114 aa9.5□□□□□ -0.89
EXOSC1-211ENST00000489158 ZC3H11AO75152 810 aaKnown RBP eCLIP9.5□□□□□ -0.89
EXOSC1-211ENST00000489158 GJB6O95452 261 aa9.5□□□□□ -0.89
EXOSC1-211ENST00000489158 HSPA1AP0DMV8 641 aaKnown RBP9.5□□□□□ -0.89
EXOSC1-211ENST00000489158 HSPA1BP0DMV9 641 aaKnown RBP9.5□□□□□ -0.89
EXOSC1-211ENST00000489158 COILP38432 576 aaPredicted RBP9.5□□□□□ -0.89
EXOSC1-211ENST00000489158 KCNJ1P48048 391 aa9.5□□□□□ -0.89
EXOSC1-211ENST00000489158 PKN2Q16513 984 aaKnown RBP9.5□□□□□ -0.89
EXOSC1-211ENST00000489158 EPC2Q52LR7 807 aa9.5□□□□□ -0.89
EXOSC1-211ENST00000489158 SLC27A1Q6PCB7 646 aa9.5□□□□□ -0.89
EXOSC1-211ENST00000489158 FAM43BQ6ZT52 329 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms