RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 RPN1P04843 607 aaKnown RBP13.44□□□□□ -0.26
SRRM1-216ENST00000489130 FAM163BP0C2L3 166 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 DDX6P26196 483 aaKnown RBP eCLIP13.44□□□□□ -0.26
SRRM1-216ENST00000489130 NDUFA8P51970 172 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 CLDN10P78369 228 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 MAPRE1Q15691 268 aaKnown RBP13.44□□□□□ -0.26
SRRM1-216ENST00000489130 DDR2Q16832 855 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 ZNF528Q3MIS6 628 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 ARHGAP29Q52LW3 1261 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 SDHAF4Q5VUM1 108 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 C1orf228Q6PIY5 440 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 C4orf50Q6ZRC1 276 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 SLC9A9Q8IVB4 645 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 CMTM8Q8IZV2 173 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 BPIFB1Q8TDL5 484 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 CSGALNACT1Q8TDX6 532 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 MYRFLQ96LU7 910 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 XYLT2Q9H1B5 865 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 KCTD10Q9H3F6 313 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 CRTAC1Q9NQ79 661 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 SPATA6Q9NWH7 488 aaPredicted RBP13.44□□□□□ -0.26
SRRM1-216ENST00000489130 FBXO4Q9UKT5 387 aa13.44□□□□□ -0.26
SRRM1-216ENST00000489130 TICRRQ7Z2Z1 1910 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 A0A1W2PQ27 194 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 A0A1W2PQ64 194 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 A0A1W2PQD8 194 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 PDXKO00764 312 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 LAMTOR5O43504 91 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 ATP2C2O75185 946 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 TADA3O75528 432 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 ATICP31939 592 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 MAGEA11P43364 429 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 PSMC1P62191 440 aaKnown RBP13.43□□□□□ -0.26
SRRM1-216ENST00000489130 ZC3H14Q6PJT7 736 aaKnown RBP13.43□□□□□ -0.26
SRRM1-216ENST00000489130 VSTM1Q6UX27 236 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 GPIHBP1Q8IV16 184 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 CELF5Q8N6W0 485 aaKnown RBP13.43□□□□□ -0.26
SRRM1-216ENST00000489130 STKLD1Q8NE28 680 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 PLEKHO2Q8TD55 490 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 PARD3BQ8TEW8 1205 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 FAM3CQ92520 227 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 MYLPFQ96A32 169 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 CEP295NLQ96MC4 621 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 MMS19Q96T76 1030 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 SEMA4AQ9H3S1 761 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 C8orf33Q9H7E9 229 aaPredicted RBP13.43□□□□□ -0.26
SRRM1-216ENST00000489130 VRTNQ9H8Y1 702 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 UXTQ9UBK9 157 aaPredicted RBP13.43□□□□□ -0.26
SRRM1-216ENST00000489130 NDRG2Q9UN36 371 aaKnown RBP13.43□□□□□ -0.26
SRRM1-216ENST00000489130 MAGED2Q9UNF1 606 aaPredicted RBP13.43□□□□□ -0.26
SRRM1-216ENST00000489130 NME7Q9Y5B8 376 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 R4GN57 208 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 PATJQ8NI35 1801 aa13.43□□□□□ -0.26
SRRM1-216ENST00000489130 SLC38A8A6NNN8 435 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 LRRIQ3A6PVS8 624 aaPredicted RBP13.42□□□□□ -0.26
SRRM1-216ENST00000489130 RHOBTB3O94955 611 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 PRR29P0C7W0 189 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 CCNE1P24864 410 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 AVPR1AP37288 418 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 CASP4P49662 377 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 AP3M2P53677 418 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 MYL6P60660 151 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 TNNC1P63316 161 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 PLCB2Q00722 1185 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 DPYDQ12882 1025 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 TRPC3Q13507 836 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 WDR72Q3MJ13 1102 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 TDRD10Q5VZ19 366 aaKnown RBP13.42□□□□□ -0.26
SRRM1-216ENST00000489130 MAMSTRQ6ZN01 415 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 MAB21L3Q8N8X9 362 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 FSIP1Q8NA03 581 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 MYCBPAPQ8TBZ2 947 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 MRPS31Q92665 395 aaKnown RBP13.42□□□□□ -0.26
SRRM1-216ENST00000489130 SYAP1Q96A49 352 aaPredicted RBP13.42□□□□□ -0.26
SRRM1-216ENST00000489130 PCED1BQ96HM7 432 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 ZFYVE19Q96K21 471 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 MRPL45Q9BRJ2 306 aaKnown RBP13.42□□□□□ -0.26
SRRM1-216ENST00000489130 IER2Q9BTL4 223 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 SMG9Q9H0W8 520 aaKnown RBP13.42□□□□□ -0.26
SRRM1-216ENST00000489130 CHRDQ9H2X0 955 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 SNX25Q9H3E2 840 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 GOLPH3LQ9H4A5 285 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 KIF9Q9HAQ2 790 aa13.42□□□□□ -0.26
SRRM1-216ENST00000489130 PRMT8Q9NR22 394 aaPredicted RBP13.42□□□□□ -0.26
SRRM1-216ENST00000489130 MAGEC2Q9UBF1 373 aaPredicted RBP13.42□□□□□ -0.26
SRRM1-216ENST00000489130 ZFHX2Q9C0A1 2572 aaPredicted RBP13.41□□□□□ -0.26
SRRM1-216ENST00000489130 C4BPAP04003 597 aaKnown RBP13.41□□□□□ -0.26
SRRM1-216ENST00000489130 NR3C1P04150 777 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 PDGFRBP09619 1106 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 BDNFP23560 247 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 GNL1P36915 607 aaPredicted RBP13.41□□□□□ -0.26
SRRM1-216ENST00000489130 MTAPQ13126 283 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 ZNF268Q14587 947 aaPredicted RBP13.41□□□□□ -0.26
SRRM1-216ENST00000489130 TXNDC8Q6A555 127 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 KRBA2Q6ZNG9 492 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 MON1AQ86VX9 555 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 RALGPS2Q86X27 583 aaPredicted RBP13.41□□□□□ -0.26
SRRM1-216ENST00000489130 SCN4BQ8IWT1 228 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 NELL1Q92832 810 aa13.41□□□□□ -0.26
SRRM1-216ENST00000489130 USP13Q92995 863 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms