RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 WDTC1Q8N5D0 677 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 ANKRD52Q8NB46 1076 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 TMEM35BQ8NCS4 154 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 PCED1BQ96HM7 432 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 B3GALT6Q96L58 329 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 DESI2Q9BSY9 194 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 B3GNT5Q9BYG0 378 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 ZBP1Q9H171 429 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 PDCL3Q9H2J4 239 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 SEPT11Q9NVA2 429 aaKnown RBP16.98■□□□□ 0.31
CLDN11-208ENST00000488989 TAS2R14Q9NYV8 317 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 GTF3C4Q9UKN8 822 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 INTUQ9ULD6 942 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 YBX2Q9Y2T7 364 aaKnown RBP16.98■□□□□ 0.31
CLDN11-208ENST00000488989 CEP83Q9Y592 693 aa16.98■□□□□ 0.31
CLDN11-208ENST00000488989 CA3P07451 260 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 CCDC175P0C221 793 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 CTSAP10619 480 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 MAGEA1P43355 309 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 CYP27A1Q02318 531 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 UBE3AQ05086 875 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 SMARCB1Q12824 385 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 RAB30Q15771 203 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 PSMD5Q16401 504 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 CCDC142Q17RM4 750 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 SLC8B1Q6J4K2 584 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 RSPO2Q6UXX9 243 aaPredicted RBP16.97■□□□□ 0.31
CLDN11-208ENST00000488989 PHF13Q86YI8 300 aaPredicted RBP16.97■□□□□ 0.31
CLDN11-208ENST00000488989 VPS52Q8N1B4 723 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 SLC2A14Q8TDB8 520 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 RIN2Q8WYP3 895 aaPredicted RBP16.97■□□□□ 0.31
CLDN11-208ENST00000488989 MYLPFQ96A32 169 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 TGS1Q96RS0 853 aaKnown RBP16.97■□□□□ 0.31
CLDN11-208ENST00000488989 C17orf80Q9BSJ5 609 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 PBX4Q9BYU1 374 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 LUC7LQ9NQ29 371 aaKnown RBP16.97■□□□□ 0.31
CLDN11-208ENST00000488989 TMLHEQ9NVH6 421 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 PPP2R2CQ9Y2T4 447 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 PCDHA13Q9Y5I0 950 aa16.97■□□□□ 0.31
CLDN11-208ENST00000488989 ATG2AQ2TAZ0 1938 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 M0QYV0 167 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 PJA2O43164 708 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 URODP06132 367 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 SSTR3P32745 418 aaPredicted RBP16.96■□□□□ 0.31
CLDN11-208ENST00000488989 RPL34P49207 117 aaKnown RBP16.96■□□□□ 0.31
CLDN11-208ENST00000488989 VAV2P52735 878 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 BCAT1P54687 386 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 TAP1Q03518 808 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 BST2Q10589 180 aaKnown RBP16.96■□□□□ 0.31
CLDN11-208ENST00000488989 GPR17Q13304 367 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 NFE2Q16621 373 aaPredicted RBP16.96■□□□□ 0.31
CLDN11-208ENST00000488989 NAA35Q5VZE5 725 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 KIAA1841Q6NSI8 718 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 PRSS55Q6UWB4 352 aaPredicted RBP16.96■□□□□ 0.31
CLDN11-208ENST00000488989 C4orf50Q6ZRC1 276 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 FAM35AQ86V20 835 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 PASD1Q8IV76 773 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 FBXO22Q8NEZ5 403 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 SPPL3Q8TCT6 385 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 STK32AQ8WU08 396 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 SLC35F5Q8WV83 523 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 FUBP3Q96I24 572 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLDN11-208ENST00000488989 VCPIP1Q96JH7 1222 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 DUSP16Q9BY84 665 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 RXFP1Q9HBX9 757 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLDN11-208ENST00000488989 FNIP2Q9P278 1114 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 HESX1Q9UBX0 185 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 SSX2IPQ9Y2D8 614 aa16.96■□□□□ 0.31
CLDN11-208ENST00000488989 GREB1Q4ZG55 1949 aa16.96■□□□□ 0.3
CLDN11-208ENST00000488989 MTCL1Q9Y4B5 1905 aaKnown RBP16.96■□□□□ 0.3
CLDN11-208ENST00000488989 ANKRD62A6NC57 917 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 CLDN5O00501 218 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 FTLP02792 175 aaPredicted RBP16.95■□□□□ 0.3
CLDN11-208ENST00000488989 H2AFZP0C0S5 128 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 MMP8P22894 467 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 ADORA2BP29275 332 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 PBX2P40425 430 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 PTP4A2Q12974 167 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 CFAP221Q4G0U5 840 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 H2AFVQ71UI9 128 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 MON1BQ7L1V2 547 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 ZSCAN30Q86W11 494 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 TXLNBQ8N3L3 684 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 C1orf131Q8NDD1 294 aaKnown RBP16.95■□□□□ 0.3
CLDN11-208ENST00000488989 C2orf15Q8WU43 125 aaKnown RBP16.95■□□□□ 0.3
CLDN11-208ENST00000488989 CLSTN3Q9BQT9 956 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 UBXN6Q9BZV1 441 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 CSNK1G1Q9HCP0 422 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 CYLDQ9NQC7 956 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 CYTH4Q9UIA0 394 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 MSRAQ9UJ68 235 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 IRAK3Q9Y616 596 aa16.95■□□□□ 0.3
CLDN11-208ENST00000488989 LAMA2P24043 3122 aaKnown RBP16.94■□□□□ 0.3
CLDN11-208ENST00000488989 TMCO5BA8MYB1 307 aa16.94■□□□□ 0.3
CLDN11-208ENST00000488989 XPO1O14980 1071 aaKnown RBP16.94■□□□□ 0.3
CLDN11-208ENST00000488989 ZSCAN12O43309 604 aa16.94■□□□□ 0.3
CLDN11-208ENST00000488989 OR4Q2P0C623 313 aa16.94■□□□□ 0.3
CLDN11-208ENST00000488989 FAM200BP0CF97 657 aa16.94■□□□□ 0.3
CLDN11-208ENST00000488989 NPR3P17342 541 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms