RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 NLRP12P59046 1061 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 NUCB2P80303 420 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 PLCB2Q00722 1185 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 BIRC3Q13489 604 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 WDR72Q3MJ13 1102 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 ARHGAP29Q52LW3 1261 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 SCARA3Q6AZY7 606 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 FAM171BQ6P995 826 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 ZC3H14Q6PJT7 736 aaKnown RBP14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 VSTM1Q6UX27 236 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 KRBA2Q6ZNG9 492 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 PARD3BQ8TEW8 1205 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 MRPS31Q92665 395 aaKnown RBP14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 TRMT2BQ96GJ1 504 aaKnown RBP14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 CHAMP1Q96JM3 812 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 CEP295NLQ96MC4 621 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 SNX25Q9H3E2 840 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 KCTD10Q9H3F6 313 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 DMAC2Q9NW81 257 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 MAGEC2Q9UBF1 373 aaPredicted RBP14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 MAGED2Q9UNF1 606 aaPredicted RBP14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 FRMD4BQ9Y2L6 1034 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 PIAS3Q9Y6X2 628 aa14.77□□□□□ -0.05
SPTLC1-207ENST00000488921 DMDP11532 3685 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 NCANO14594 1321 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 MYBPHLA2RUH7 354 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 NOL4O94818 638 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 CST3P01034 146 aaPredicted RBP14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 NR3C1P04150 777 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 HMGA1P17096 107 aaKnown RBP14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 CD72P21854 359 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 AVPR1AP37288 418 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 RPS9P46781 194 aaKnown RBP14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 PSMC1P62191 440 aaKnown RBP14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 CLDN10P78369 228 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 DPYDQ12882 1025 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 CMTM8Q8IZV2 173 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 CELF5Q8N6W0 485 aaKnown RBP14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 BPIFB1Q8TDL5 484 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 NKD2Q969F2 451 aaPredicted RBP14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 MYLPFQ96A32 169 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 IER2Q9BTL4 223 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 GZF1Q9H116 711 aaPredicted RBP14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 C8orf33Q9H7E9 229 aaPredicted RBP14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 VRTNQ9H8Y1 702 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 KIF9Q9HAQ2 790 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 THG1LQ9NWX6 298 aaKnown RBP14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 EHD2Q9NZN4 543 aa14.76□□□□□ -0.05
SPTLC1-207ENST00000488921 GOLGA6L4A6NEF3 574 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 SLC38A8A6NNN8 435 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 LRRIQ3A6PVS8 624 aaPredicted RBP14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 ARNTLO00327 626 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 TRIM66O15016 1216 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 MAPK13O15264 365 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 LAMTOR5O43504 91 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 HCRTO43612 131 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 LRRN2O75325 713 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 ZNF202O95125 648 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 PRAMEF12O95522 483 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 F11P03951 625 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 PRR29P0C7W0 189 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 LMO2P25791 158 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 ANXA13P27216 316 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 GNL1P36915 607 aaPredicted RBP14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 CASP4P49662 377 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 GPR15P49685 360 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 CYP27A1Q02318 531 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 KCNB1Q14721 858 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 NFIL3Q16649 462 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 DDR2Q16832 855 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 ZNF699Q32M78 642 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 FRMD5Q7Z6J6 570 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 SCN4BQ8IWT1 228 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 OR6B3Q8NGW1 331 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 MYCBPAPQ8TBZ2 947 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 FAM3CQ92520 227 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 ZNF516Q92618 1163 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 CLDN23Q96B33 292 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 RSPRY1Q96DX4 576 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 MYRFLQ96LU7 910 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 SEMA4AQ9H3S1 761 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 GOLPH3LQ9H4A5 285 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 GDPD2Q9HCC8 539 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 CRTAC1Q9NQ79 661 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 SPATA6Q9NWH7 488 aaPredicted RBP14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 NXF1Q9UBU9 619 aaKnown RBP14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 FBXO4Q9UKT5 387 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 TRAF3IP3Q9Y228 551 aa14.75□□□□□ -0.05
SPTLC1-207ENST00000488921 PRR23AA6NEV1 266 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 ATP2C2O75185 946 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 PDGFRBP09619 1106 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 P4HA1P13674 534 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 KPNA1P52294 538 aaPredicted RBP14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 MYL6P60660 151 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 NCOA4Q13772 614 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 CCDC142Q17RM4 750 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 ZNF667Q5HYK9 610 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 SDHAF4Q5VUM1 108 aa14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 TDRD10Q5VZ19 366 aaKnown RBP14.74□□□□□ -0.05
SPTLC1-207ENST00000488921 CEP135Q66GS9 1140 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms