RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 PHKA2P46019 1235 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 PPP1R7Q15435 360 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 C1orf53Q5VUE5 145 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 ACAD10Q6JQN1 1059 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 CCDC50Q8IVM0 306 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 SEMA4DQ92854 862 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 HVCN1Q96D96 273 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 BTBD6Q96KE9 485 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 NT5C1BQ96P26 610 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 WHRNQ9P202 907 aa19.36■□□□□ 0.69
COL16A1-215ENST00000488897 PIN4Q9Y237 131 aaKnown RBP19.36■□□□□ 0.69
COL16A1-215ENST00000488897 FSCN2O14926 492 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 GAS2O43903 313 aaKnown RBP19.35■□□□□ 0.69
COL16A1-215ENST00000488897 TSPAN1O60635 241 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 ADSSP30520 456 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 AUHQ13825 339 aaKnown RBP19.35■□□□□ 0.69
COL16A1-215ENST00000488897 TFDP1Q14186 410 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 MAPK6Q16659 721 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 HELQQ8TDG4 1101 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 EPS8L3Q8TE67 593 aaKnown RBP19.35■□□□□ 0.69
COL16A1-215ENST00000488897 PARD3BQ8TEW8 1205 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 SAAL1Q96ER3 474 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 PDE4DIPQ5VU43 2346 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 DNAJC8O75937 253 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-215ENST00000488897 KCNJ1P48048 391 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 XRCC4Q13426 336 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 SPRED3Q2MJR0 410 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 CDCA2Q69YH5 1023 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-215ENST00000488897 USP37Q86T82 979 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 RTN4RL1Q86UN2 441 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-215ENST00000488897 CBWD2Q8IUF1 395 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 ZBTB8OSQ8IWT0 167 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 FUKQ8N0W3 1084 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 NME8Q8N427 588 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 MAIP1Q8WWC4 291 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 SPIRE2Q8WWL2 714 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 TCHPQ9BT92 498 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 APOL6Q9BWW8 343 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 NSRP1Q9H0G5 558 aaKnown RBP19.35■□□□□ 0.69
COL16A1-215ENST00000488897 SAMD15Q9P1V8 674 aa19.35■□□□□ 0.69
COL16A1-215ENST00000488897 HNRNPDLO14979 420 aaKnown RBP19.34■□□□□ 0.69
COL16A1-215ENST00000488897 GTF2H1P32780 548 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 PDE4CQ08493 712 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 EXOC8Q8IYI6 725 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 FBXL13Q8NEE6 735 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 TMC2Q8TDI7 906 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 CCDC127Q96BQ5 260 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 FZD8Q9H461 694 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 ACP6Q9NPH0 428 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 MAN1A1P33908 653 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 SYDE1Q6ZW31 735 aaPredicted RBP19.34■□□□□ 0.69
COL16A1-215ENST00000488897 OTOP2Q7RTS6 562 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 LRRC34Q8IZ02 419 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 RNF169Q8NCN4 708 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 UHMK1Q8TAS1 419 aaKnown RBP19.34■□□□□ 0.69
COL16A1-215ENST00000488897 SGSM3Q96HU1 749 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 PRMT1Q99873 361 aaKnown RBP19.34■□□□□ 0.69
COL16A1-215ENST00000488897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.34■□□□□ 0.69
COL16A1-215ENST00000488897 HOMER3Q9NSC5 361 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 RAB20Q9NX57 234 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 PPME1Q9Y570 386 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 CHD9Q3L8U1 2897 aa19.34■□□□□ 0.69
COL16A1-215ENST00000488897 ITIH2P19823 946 aa19.33■□□□□ 0.69
COL16A1-215ENST00000488897 SLCO1A2P46721 670 aa19.33■□□□□ 0.69
COL16A1-215ENST00000488897 BFSP2Q13515 415 aa19.33■□□□□ 0.69
COL16A1-215ENST00000488897 SGO2Q562F6 1265 aa19.33■□□□□ 0.69
COL16A1-215ENST00000488897 CYB5D1Q6P9G0 228 aa19.33■□□□□ 0.69
COL16A1-215ENST00000488897 C16orf59Q7L2K0 433 aa19.33■□□□□ 0.69
COL16A1-215ENST00000488897 MAP4K3Q8IVH8 894 aa19.33■□□□□ 0.69
COL16A1-215ENST00000488897 LPPQ93052 612 aa19.33■□□□□ 0.69
COL16A1-215ENST00000488897 RNF39Q9H2S5 420 aa19.33■□□□□ 0.69
COL16A1-215ENST00000488897 TIMP1P01033 207 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 RDXP35241 583 aaKnown RBP19.33■□□□□ 0.68
COL16A1-215ENST00000488897 TNFSF9P41273 254 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 AFF1P51825 1210 aaKnown RBP19.33■□□□□ 0.68
COL16A1-215ENST00000488897 STRN3Q13033 797 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 SNCBQ16143 134 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 ZNF568Q3ZCX4 644 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 ZNF410Q86VK4 478 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 CCDC25Q86WR0 208 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 CPNE8Q86YQ8 564 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 PARP9Q8IXQ6 854 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 THNSL1Q8IYQ7 743 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 DDX1Q92499 740 aaKnown RBP19.33■□□□□ 0.68
COL16A1-215ENST00000488897 FAM81BQ96LP2 452 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 C17orf75Q9HAS0 396 aa19.33■□□□□ 0.68
COL16A1-215ENST00000488897 CLDN3O15551 220 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 GSTA1P08263 222 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 ATP5DP30049 168 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 ACOT2P49753 483 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 CLEC16AQ2KHT3 1053 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 UBAP2Q5T6F2 1119 aaKnown RBP19.32■□□□□ 0.68
COL16A1-215ENST00000488897 FAM117BQ6P1L5 589 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 ENOSF1Q7L5Y1 443 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 MFSD14AQ96MC6 490 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 SERPINB12Q96P63 405 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 ACO2Q99798 780 aaKnown RBP19.32■□□□□ 0.68
COL16A1-215ENST00000488897 HAUS2Q9NVX0 235 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 XIRP2A4UGR9 3374 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 ATP2C2O75185 946 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms