RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 HSFX1Q9UBD0 423 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 KCNE5Q9UJ90 142 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 OGDHLQ9ULD0 1010 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 CDYLQ9Y232 598 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 SNX13Q9Y5W8 968 aa4.01□□□□□ -1.77
CD46-215ENST00000488596 TMEM233B4DJY2 109 aa4□□□□□ -1.77
CD46-215ENST00000488596 F8W8V4 182 aa4□□□□□ -1.77
CD46-215ENST00000488596 M0QYG6 137 aa4□□□□□ -1.77
CD46-215ENST00000488596 KPNA5O15131 536 aa4□□□□□ -1.77
CD46-215ENST00000488596 FRS3O43559 492 aa4□□□□□ -1.77
CD46-215ENST00000488596 TBC1D4O60343 1298 aa4□□□□□ -1.77
CD46-215ENST00000488596 GNAI2P04899 355 aa4□□□□□ -1.77
CD46-215ENST00000488596 IFIT2P09913 472 aaKnown RBP4□□□□□ -1.77
CD46-215ENST00000488596 PRIM2P49643 509 aa4□□□□□ -1.77
CD46-215ENST00000488596 VAV2P52735 878 aa4□□□□□ -1.77
CD46-215ENST00000488596 SRSF4Q08170 494 aaKnown RBP4□□□□□ -1.77
CD46-215ENST00000488596 HDAC1Q13547 482 aaPredicted RBP4□□□□□ -1.77
CD46-215ENST00000488596 BOP1Q14137 746 aaKnown RBP4□□□□□ -1.77
CD46-215ENST00000488596 LONRF1Q17RB8 773 aa4□□□□□ -1.77
CD46-215ENST00000488596 ZNF788Q6ZQV5 615 aa4□□□□□ -1.77
CD46-215ENST00000488596 C1QL2Q7Z5L3 287 aa4□□□□□ -1.77
CD46-215ENST00000488596 CFAP52Q8N1V2 620 aa4□□□□□ -1.77
CD46-215ENST00000488596 LNX2Q8N448 690 aa4□□□□□ -1.77
CD46-215ENST00000488596 SLC15A4Q8N697 577 aa4□□□□□ -1.77
CD46-215ENST00000488596 FAM46DQ8NEK8 389 aa4□□□□□ -1.77
CD46-215ENST00000488596 OR6B3Q8NGW1 331 aa4□□□□□ -1.77
CD46-215ENST00000488596 FBXO41Q8TF61 875 aa4□□□□□ -1.77
CD46-215ENST00000488596 NUP133Q8WUM0 1156 aa4□□□□□ -1.77
CD46-215ENST00000488596 SMG7Q92540 1137 aaKnown RBP4□□□□□ -1.77
CD46-215ENST00000488596 MAML1Q92585 1016 aa4□□□□□ -1.77
CD46-215ENST00000488596 PMM1Q92871 262 aa4□□□□□ -1.77
CD46-215ENST00000488596 SCAMP4Q969E2 229 aa4□□□□□ -1.77
CD46-215ENST00000488596 ZNF778Q96MU6 729 aa4□□□□□ -1.77
CD46-215ENST00000488596 TINAGL1Q9GZM7 467 aaPredicted RBP4□□□□□ -1.77
CD46-215ENST00000488596 SMURF2Q9HAU4 748 aa4□□□□□ -1.77
CD46-215ENST00000488596 GPR35Q9HC97 309 aa4□□□□□ -1.77
CD46-215ENST00000488596 ARPP21Q9UBL0 812 aaPredicted RBP4□□□□□ -1.77
CD46-215ENST00000488596 MED16Q9Y2X0 877 aa4□□□□□ -1.77
CD46-215ENST00000488596 WIPF3A6NGB9 483 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 ISM1B1AKI9 464 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 ANXA1P04083 346 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 EN2P19622 333 aaPredicted RBP3.99□□□□□ -1.77
CD46-215ENST00000488596 CHRM3P20309 590 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 SERPINB3P29508 390 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 ALDH5A1P51649 535 aaPredicted RBP3.99□□□□□ -1.77
CD46-215ENST00000488596 AK2P54819 239 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 UCP3P55916 312 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 SLC13A2Q13183 592 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 ZNF783Q6ZMS7 281 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 SRLQ86TD4 932 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 KRT78Q8N1N4 520 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 MPP5Q8N3R9 675 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 DNAJC5GQ8N7S2 189 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 KBTBD7Q8WVZ9 684 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 STRBPQ96SI9 672 aaKnown RBP3.99□□□□□ -1.77
CD46-215ENST00000488596 PNKPQ96T60 521 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 BRIP1Q9BX63 1249 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 RLIMQ9NVW2 624 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 COL20A1Q9P218 1284 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 TBC1D30Q9Y2I9 924 aa3.99□□□□□ -1.77
CD46-215ENST00000488596 MTO1Q9Y2Z2 717 aaKnown RBP3.99□□□□□ -1.77
CD46-215ENST00000488596 POLRMTO00411 1230 aaKnown RBP3.98□□□□□ -1.77
CD46-215ENST00000488596 ONECUT2O95948 504 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 GRPP07492 148 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 SLC11A2P49281 568 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 ZNF81P51508 661 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 RPS16P62249 146 aaKnown RBP3.98□□□□□ -1.77
CD46-215ENST00000488596 ZNF844Q08AG5 666 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 ZNF543Q08ER8 600 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 IFIT5Q13325 482 aaKnown RBP3.98□□□□□ -1.77
CD46-215ENST00000488596 BIRC2Q13490 618 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 BRD3Q15059 726 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 GEN1Q17RS7 908 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 AMOTQ4VCS5 1084 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 AKNAD1Q5T1N1 836 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 KLHDC7AQ5VTJ3 777 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 FOXR2Q6PJQ5 311 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 C11orf96Q7Z7L8 435 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 LIX1LQ8IVB5 337 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 Q8NA96 180 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 SSH3Q8TE77 659 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 SUCLG2Q96I99 432 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 TNIP3Q96KP6 325 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 CCDC138Q96M89 665 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 UROC1Q96N76 676 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 TRIB1Q96RU8 372 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 RPS6KC1Q96S38 1066 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 SMOQ99835 787 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 MYD88Q99836 296 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 ELAC2Q9BQ52 826 aaKnown RBP3.98□□□□□ -1.77
CD46-215ENST00000488596 C1QTNF7Q9BXJ2 289 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 DPH1Q9BZG8 443 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 SMOC2Q9H3U7 446 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 GJB4Q9NTQ9 266 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 XPR1Q9UBH6 696 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 DMTF1Q9Y222 760 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 TMX2Q9Y320 296 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 PLEKHM1Q9Y4G2 1056 aa3.98□□□□□ -1.77
CD46-215ENST00000488596 POM121BA6NF01 834 aa3.97□□□□□ -1.77
CD46-215ENST00000488596 MYO1CO00159 1063 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms