RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 TRAV19A0A0A6YYK7 116 aa20.47■□□□□ 0.87
GGPS1-206ENST00000488594 PPP1R37O75864 691 aa20.47■□□□□ 0.87
GGPS1-206ENST00000488594 POLR2BP30876 1174 aaKnown RBP20.47■□□□□ 0.87
GGPS1-206ENST00000488594 TFAMQ00059 246 aaKnown RBP20.47■□□□□ 0.87
GGPS1-206ENST00000488594 DDR2Q16832 855 aa20.47■□□□□ 0.87
GGPS1-206ENST00000488594 INTS6LQ5JSJ4 861 aaKnown RBP20.47■□□□□ 0.87
GGPS1-206ENST00000488594 BRAPQ7Z569 592 aa20.47■□□□□ 0.87
GGPS1-206ENST00000488594 SFR1Q86XK3 245 aa20.47■□□□□ 0.87
GGPS1-206ENST00000488594 FSIP1Q8NA03 581 aa20.47■□□□□ 0.87
GGPS1-206ENST00000488594 RPLP0P6Q8NHW5 317 aa20.47■□□□□ 0.87
GGPS1-206ENST00000488594 CD101Q93033 1021 aa20.47■□□□□ 0.87
GGPS1-206ENST00000488594 FAM213AQ9BRX8 229 aa20.47■□□□□ 0.87
GGPS1-206ENST00000488594 AGAP1Q9UPQ3 857 aa20.47■□□□□ 0.87
GGPS1-206ENST00000488594 TADA3O75528 432 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 ITGB3P05106 788 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 CYP2F1P24903 491 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 IFNAR2P48551 515 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 GRIN1Q05586 938 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 NR1H3Q13133 447 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 ZNF77Q15935 545 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 CFAP221Q4G0U5 840 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 SDHAF4Q5VUM1 108 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 RNF43Q68DV7 783 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 C11orf74Q86VG3 221 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 BRSK2Q8IWQ3 736 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 FUBP3Q96I24 572 aaKnown RBP eCLIP20.46■□□□□ 0.87
GGPS1-206ENST00000488594 PKMYT1Q99640 499 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 STRA6Q9BX79 667 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 DUSP15Q9H1R2 295 aaPredicted RBP20.46■□□□□ 0.87
GGPS1-206ENST00000488594 MRPL44Q9H9J2 332 aaKnown RBP20.46■□□□□ 0.87
GGPS1-206ENST00000488594 TRPC7Q9HCX4 862 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 STK17AQ9UEE5 414 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 ITGA11Q9UKX5 1188 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 L1RE1Q9UN81 338 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 SDK1Q7Z5N4 2213 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 SPAG17Q6Q759 2223 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 KCNK5O95279 499 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 LDHAP00338 332 aaKnown RBP20.46■□□□□ 0.87
GGPS1-206ENST00000488594 CKMP06732 381 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 PCSK1P29120 753 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 LHX1P48742 406 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 PDE6CP51160 858 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 USP4Q13107 963 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 DMC1Q14565 340 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 SPATA2LQ8IUW3 424 aaPredicted RBP20.46■□□□□ 0.87
GGPS1-206ENST00000488594 C1orf127Q8N9H9 656 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 STKLD1Q8NE28 680 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 ACCSQ96QU6 501 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 IKZF4Q9H2S9 585 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 POLR3BQ9NW08 1133 aaPredicted RBP20.46■□□□□ 0.87
GGPS1-206ENST00000488594 GDAP2Q9NXN4 497 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 GTF3C4Q9UKN8 822 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 SMC3Q9UQE7 1217 aa20.46■□□□□ 0.87
GGPS1-206ENST00000488594 ANK1P16157 1881 aa20.45■□□□□ 0.87
GGPS1-206ENST00000488594 GAP43P17677 238 aa20.45■□□□□ 0.86
GGPS1-206ENST00000488594 SF3A1Q15459 793 aaKnown RBP20.45■□□□□ 0.86
GGPS1-206ENST00000488594 EML3Q32P44 896 aa20.45■□□□□ 0.86
GGPS1-206ENST00000488594 L1TD1Q5T7N2 865 aaKnown RBP20.45■□□□□ 0.86
GGPS1-206ENST00000488594 LARP1BQ659C4 914 aaKnown RBP20.45■□□□□ 0.86
GGPS1-206ENST00000488594 DYMQ7RTS9 669 aa20.45■□□□□ 0.86
GGPS1-206ENST00000488594 CSGALNACT2Q8N6G5 542 aa20.45■□□□□ 0.86
GGPS1-206ENST00000488594 TOP6BLQ8N6T0 577 aa20.45■□□□□ 0.86
GGPS1-206ENST00000488594 SMOC1Q9H4F8 434 aa20.45■□□□□ 0.86
GGPS1-206ENST00000488594 RBAKQ9NYW8 714 aaPredicted RBP20.45■□□□□ 0.86
GGPS1-206ENST00000488594 CCDC39Q9UFE4 941 aa20.45■□□□□ 0.86
GGPS1-206ENST00000488594 WNT6Q9Y6F9 365 aa20.45■□□□□ 0.86
GGPS1-206ENST00000488594 TULP1O00294 542 aaPredicted RBP20.44■□□□□ 0.86
GGPS1-206ENST00000488594 GABRDO14764 452 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 CAVIN2O95810 425 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 TCF3P15923 654 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 GARTP22102 1010 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 ACAT1P24752 427 aaKnown RBP20.44■□□□□ 0.86
GGPS1-206ENST00000488594 RBP5P82980 135 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 CREB5Q02930 508 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 PSMD2Q13200 908 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 KCNB1Q14721 858 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 NAIF1Q69YI7 327 aaPredicted RBP20.44■□□□□ 0.86
GGPS1-206ENST00000488594 ADGRF2Q8IZF7 708 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 EZH1Q92800 747 aaPredicted RBP20.44■□□□□ 0.86
GGPS1-206ENST00000488594 CEP295NLQ96MC4 621 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 SLC22A12Q96S37 553 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 CYP2S1Q96SQ9 504 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 EDEM2Q9BV94 578 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 GCNT4Q9P109 453 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.44■□□□□ 0.86
GGPS1-206ENST00000488594 PCDHB13Q9Y5F0 798 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 SNX9Q9Y5X1 595 aa20.44■□□□□ 0.86
GGPS1-206ENST00000488594 USP24Q9UPU5 2620 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 BCLAF3A2AJT9 711 aaKnown RBP20.43■□□□□ 0.86
GGPS1-206ENST00000488594 PFKLP17858 780 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 MAGEA11P43364 429 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 WNT7BP56706 349 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 KCNA1Q09470 495 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 ALCAMQ13740 583 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 TCEAL6Q6IPX3 200 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 C4orf50Q6ZRC1 276 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 TTC16Q8NEE8 873 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 TSTD1Q8NFU3 115 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 CXorf38Q8TB03 319 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 SH3RF2Q8TEC5 729 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms