RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 APBA1Q02410 837 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 GUCA2AQ02747 115 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 INCA1Q0VD86 236 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 GPR17Q13304 367 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 ADGRE1Q14246 886 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 DUSP6Q16828 381 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 SLC39A12Q504Y0 691 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 TCEAL5Q5H9L2 206 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 INTS6LQ5JSJ4 861 aaKnown RBP10.96□□□□□ -0.65
SKA1-204ENST00000488454 TPGS2Q68CL5 300 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 GJB7Q6PEY0 223 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 TMEM270Q6UE05 265 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 RSPO2Q6UXX9 243 aaPredicted RBP10.96□□□□□ -0.65
SKA1-204ENST00000488454 ACOT1Q86TX2 421 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 OSTM1Q86WC4 334 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 SPATA2LQ8IUW3 424 aaPredicted RBP10.96□□□□□ -0.65
SKA1-204ENST00000488454 CRYBG2Q8N1P7 616 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 B3GALNT2Q8NCR0 500 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 OR10T2Q8NGX3 314 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 ZNF461Q8TAF7 563 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 C2orf15Q8WU43 125 aaKnown RBP10.96□□□□□ -0.65
SKA1-204ENST00000488454 MYLIPQ8WY64 445 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 IQCDQ96DY2 449 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 TMEM176AQ96HP8 235 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 KREMEN1Q96MU8 473 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 SPAG5Q96R06 1193 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 ARID3AQ99856 593 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 RTP3Q9BQQ7 232 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 STK33Q9BYT3 514 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 ZCWPW1Q9H0M4 648 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 SIX2Q9NPC8 291 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 MTMR10Q9NXD2 777 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 GTF3C4Q9UKN8 822 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 KIAA1257Q9ULG3 409 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 MAFFQ9ULX9 164 aa10.96□□□□□ -0.65
SKA1-204ENST00000488454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.96□□□□□ -0.65
SKA1-204ENST00000488454 PRRG1O14668 218 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 ADAM12O43184 909 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 TGM5O43548 720 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 ATP2C2O75185 946 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 OR4Q2P0C623 313 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 BPIFB4P59827 614 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 PSMC1P62191 440 aaKnown RBP10.95□□□□□ -0.66
SKA1-204ENST00000488454 ROR1Q01973 937 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 CYP27A1Q02318 531 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 ADCY1Q08828 1119 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 DRAP1Q14919 205 aaPredicted RBP10.95□□□□□ -0.66
SKA1-204ENST00000488454 MDH1BQ5I0G3 518 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 LIN9Q5TKA1 542 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 IQCEQ6IPM2 695 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 C4orf50Q6ZRC1 276 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 CCDC149Q6ZUS6 474 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 ADGRD2Q7Z7M1 963 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 FMNL3Q8IVF7 1028 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 FAM160A2Q8N612 972 aaPredicted RBP10.95□□□□□ -0.66
SKA1-204ENST00000488454 ZNF397Q8NF99 534 aaPredicted RBP10.95□□□□□ -0.66
SKA1-204ENST00000488454 MYCBPAPQ8TBZ2 947 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 KAT5Q92993 513 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 PGLYRP2Q96PD5 576 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 TMEM209Q96SK2 561 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 MED10Q9BTT4 135 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 NLRC4Q9NPP4 1024 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 AFF4Q9UHB7 1163 aaKnown RBP10.95□□□□□ -0.66
SKA1-204ENST00000488454 PCDHB5Q9Y5E4 795 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 FHOD1Q9Y613 1164 aa10.95□□□□□ -0.66
SKA1-204ENST00000488454 SCN1AP35498 2009 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 ATP8B3O60423 1300 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 WDR27A2RRH5 827 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 MYBPHLA2RUH7 354 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 FOXN3O00409 490 aaPredicted RBP10.94□□□□□ -0.66
SKA1-204ENST00000488454 HCRTO43612 131 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 ABLIM3O94929 683 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 PAEPP09466 180 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 CCDC172P0C7W6 258 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 SPATA31D3P0C874 917 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 VDRP11473 427 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 ATF2P15336 505 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 CD19P15391 556 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 ACO1P21399 889 aaKnown RBP10.94□□□□□ -0.66
SKA1-204ENST00000488454 STAT1P42224 750 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 TUFMP49411 452 aaKnown RBP10.94□□□□□ -0.66
SKA1-204ENST00000488454 CLCN4P51793 760 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 RAD23BP54727 409 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 PTK2Q05397 1052 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 ORC1Q13415 861 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 SKIV2LQ15477 1246 aaKnown RBP10.94□□□□□ -0.66
SKA1-204ENST00000488454 PTPN21Q16825 1174 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 SPECC1LQ69YQ0 1117 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 DPY19L2P1Q6NXN4 242 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 LLGL2Q6P1M3 1020 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 FAM171BQ6P995 826 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 EP400NLQ6ZTU2 488 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 SPATA31D4Q6ZUB0 917 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 LRRTM3Q86VH5 581 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 RBBP8NLQ8NC74 664 aaPredicted RBP10.94□□□□□ -0.66
SKA1-204ENST00000488454 KREMEN2Q8NCW0 462 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 SPPL2BQ8TCT7 592 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 WHAMMQ8TF30 809 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 SHC3Q92529 594 aa10.94□□□□□ -0.66
SKA1-204ENST00000488454 CASP10Q92851 521 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms