RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 TBC1D13Q9NVG8 400 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 MIOSQ9NXC5 875 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 DACT1Q9NYF0 836 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 CD207Q9UJ71 328 aa6.54□□□□□ -1.36
CDHR3-213ENST00000488386 CUL9Q8IWT3 2517 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 TDRD15B5MCY1 1934 aaKnown RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 LRRIQ4A6NIV6 560 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 WASH4PA8MWX3 477 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 E9PMD0 336 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 H3BS24 57 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 ERLIN2O94905 339 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 NPTXRO95502 500 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 IMPDH2P12268 514 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 ARF4P18085 180 aaPredicted RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 ATF4P18848 351 aaPredicted RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 AKAP5P24588 427 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 GJB2P29033 226 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 MLH1P40692 756 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 SLC11A1P49279 550 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 SCNN1GP51170 649 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 PTENP60484 403 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 HMGN5P82970 282 aaKnown RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 ZP2Q05996 745 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 MBTD1Q05BQ5 628 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 RABEP1Q15276 862 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 ZRSR1Q15695 479 aaKnown RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 DUSP6Q16828 381 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 NAALADL2Q58DX5 795 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 SRGAP1Q7Z6B7 1085 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 EFHBQ8N7U6 833 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 C12orf76Q8N812 135 aaPredicted RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 FAM169BQ8N8A8 192 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 RBBP8NLQ8NC74 664 aaPredicted RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 TCP11Q8WWU5 503 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 HRASLS5Q96KN8 279 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 SPATA32Q96LK8 384 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 GAD1Q99259 594 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 JPH2Q9BR39 696 aaPredicted RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 VN1R3Q9BXE9 311 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 SRRTQ9BXP5 876 aaKnown RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 FOXP1Q9H334 677 aaPredicted RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 NXF3Q9H4D5 531 aaKnown RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 RSAD1Q9HA92 442 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 SEMA3GQ9NS98 782 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 SPG21Q9NZD8 308 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 PRG3Q9Y2Y8 225 aaPredicted RBP6.53□□□□□ -1.36
CDHR3-213ENST00000488386 IPPQ9Y573 584 aa6.53□□□□□ -1.36
CDHR3-213ENST00000488386 TTC28Q96AY4 2481 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.52□□□□□ -1.37
CDHR3-213ENST00000488386 EIF5BO60841 1220 aaKnown RBP6.52□□□□□ -1.37
CDHR3-213ENST00000488386 LYPLA2O95372 231 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 GALTP07902 379 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 CD8BP10966 210 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 ITGA4P13612 1032 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 CCT6AP40227 531 aaKnown RBP6.52□□□□□ -1.37
CDHR3-213ENST00000488386 KIR3DL1P43629 444 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 GIPRP48546 466 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 CLCN7P51798 805 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 PRKCQQ04759 706 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 RNASELQ05823 741 aaKnown RBP6.52□□□□□ -1.37
CDHR3-213ENST00000488386 SMAD4Q13485 552 aaKnown RBP6.52□□□□□ -1.37
CDHR3-213ENST00000488386 NOMO2Q5JPE7 1267 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 GLB1LQ6UWU2 654 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 TAS1R1Q7RTX1 841 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 KCNK18Q7Z418 384 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 VPS52Q8N1B4 723 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 FLCNQ8NFG4 579 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 SEC16BQ96JE7 1060 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 MSLNLQ96KJ4 702 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 B3GALT6Q96L58 329 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 SLC6A18Q96N87 628 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 ZBP1Q9H171 429 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 BHMT2Q9H2M3 363 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 CHST12Q9NRB3 414 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 ANKEF1Q9NU02 776 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 DDX19AQ9NUU7 478 aaKnown RBP6.52□□□□□ -1.37
CDHR3-213ENST00000488386 MARCH5Q9NX47 278 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 LRWD1Q9UFC0 647 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 MUTYHQ9UIF7 546 aa6.52□□□□□ -1.37
CDHR3-213ENST00000488386 NOL7Q9UMY1 257 aaKnown RBP6.52□□□□□ -1.37
CDHR3-213ENST00000488386 USP15Q9Y4E8 981 aaPredicted RBP6.52□□□□□ -1.37
CDHR3-213ENST00000488386 PLXNA3P51805 1871 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 NPHP3-ACAD11A0A0J9YXS1 232 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 ARHGEF35A5YM69 484 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 C2orf71A6NGG8 1288 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 NRP1O14786 923 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 ASAP2O43150 1006 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 CLASP2O75122 1294 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 ZNF623O75123 536 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 CXCL14O95715 111 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 WNT11O96014 354 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 EPCAMP16422 314 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 NCLP19338 710 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 IGFBP6P24592 240 aaPredicted RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 U2AF2P26368 475 aaKnown RBP eCLIP6.51□□□□□ -1.372e-16■■□□□ 12.4
CDHR3-213ENST00000488386 RPA1P27694 616 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 OR1G1P47890 313 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 ALDH7A1P49419 539 aaKnown RBP6.51□□□□□ -1.37
CDHR3-213ENST00000488386 RAB27AP51159 221 aa6.51□□□□□ -1.37
CDHR3-213ENST00000488386 GP2P55259 537 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms