RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ARHGAP44Q17R89 818 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 FKBP15Q5T1M5 1219 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 SDHAF4Q5VUM1 108 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 PTCRAQ6ISU1 281 aaPredicted RBP11.76□□□□□ -0.53
UBE4B-210ENST00000488228 DPY19L2P1Q6NXN4 242 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 TMEM270Q6UE05 265 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 C4orf50Q6ZRC1 276 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 FAM35AQ86V20 835 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 UNC93AQ86WB7 457 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 C12orf29Q8N999 325 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 SLC4A11Q8NBS3 891 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 CMASQ8NFW8 434 aaPredicted RBP11.76□□□□□ -0.53
UBE4B-210ENST00000488228 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.76□□□□□ -0.53
UBE4B-210ENST00000488228 SPPL2BQ8TCT7 592 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 GPR152Q8TDT2 470 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 C2orf15Q8WU43 125 aaKnown RBP11.76□□□□□ -0.53
UBE4B-210ENST00000488228 FAXDC2Q96IV6 333 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 TNIP3Q96KP6 325 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 NT5C1AQ9BXI3 368 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 B3GNT5Q9BYG0 378 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 PRKD2Q9BZL6 878 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 UBE2TQ9NPD8 197 aaPredicted RBP11.76□□□□□ -0.53
UBE4B-210ENST00000488228 TMEM30AQ9NV96 361 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 HCFC1R1Q9NWW0 138 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 PCDHB4Q9Y5E5 795 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 FHOD1Q9Y613 1164 aa11.76□□□□□ -0.53
UBE4B-210ENST00000488228 TTC28Q96AY4 2481 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 EPHB6O15197 1021 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 TEX33O43247 280 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 SLC34A2O95436 690 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 HNRNPA1P09651 372 aaKnown RBP eCLIP11.75□□□□□ -0.53
UBE4B-210ENST00000488228 HAPLN1P10915 354 aaPredicted RBP11.75□□□□□ -0.53
UBE4B-210ENST00000488228 KRT5P13647 590 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 SP100P23497 879 aaPredicted RBP11.75□□□□□ -0.53
UBE4B-210ENST00000488228 BDNFP23560 247 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 ADORA2BP29275 332 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 HOXA9P31269 272 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 YWHAEP62258 255 aaKnown RBP11.75□□□□□ -0.53
UBE4B-210ENST00000488228 NTHL1P78549 312 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 UBXN1Q04323 297 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 ITIH3Q06033 890 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 MAPRE1Q15691 268 aaKnown RBP11.75□□□□□ -0.53
UBE4B-210ENST00000488228 CFAP221Q4G0U5 840 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 IQCEQ6IPM2 695 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 CES5AQ6NT32 575 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 GPR149Q86SP6 731 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.75□□□□□ -0.53
UBE4B-210ENST00000488228 SCN4BQ8IWT1 228 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 FUKQ8N0W3 1084 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 RBBP8NLQ8NC74 664 aaPredicted RBP11.75□□□□□ -0.53
UBE4B-210ENST00000488228 SLC2A14Q8TDB8 520 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 SUSD6Q92537 303 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 MED10Q9BTT4 135 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 GANQ9H2C0 597 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 ADAM7Q9H2U9 754 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 POMKQ9H5K3 350 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 PIDD1Q9HB75 910 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 ABCB6Q9NP58 842 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 FAM207AQ9NSI2 230 aaPredicted RBP11.75□□□□□ -0.53
UBE4B-210ENST00000488228 CEP72Q9P209 647 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 MAFFQ9ULX9 164 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 SIK3Q9Y2K2 1263 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 ATP8B3O60423 1300 aa11.75□□□□□ -0.53
UBE4B-210ENST00000488228 BDP1A6H8Y1 2624 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 A0A1B0GTH6 734 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 XYLBO75191 536 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 PAPLNO95428 1278 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 SERPINC1P01008 464 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 CD19P15391 556 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 ZNF132P52740 706 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 FANCCQ00597 558 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 SMARCB1Q12824 385 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 PLD1Q13393 1074 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 RAPGEF1Q13905 1077 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 CBX2Q14781 532 aaPredicted RBP11.74□□□□□ -0.53
UBE4B-210ENST00000488228 DDR2Q16832 855 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 UVSSAQ2YD98 709 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 PAQR9Q6ZVX9 377 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 GRASPQ7Z6J2 395 aaPredicted RBP11.74□□□□□ -0.53
UBE4B-210ENST00000488228 GPIHBP1Q8IV16 184 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 CRYBG2Q8N1P7 616 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 TTC39CQ8N584 583 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 GIPC2Q8TF65 315 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 JAKMIP2Q96AA8 810 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 FUBP3Q96I24 572 aaKnown RBP eCLIP11.74□□□□□ -0.53
UBE4B-210ENST00000488228 PCMTD1Q96MG8 357 aaPredicted RBP11.74□□□□□ -0.53
UBE4B-210ENST00000488228 NAP1L5Q96NT1 182 aaPredicted RBP11.74□□□□□ -0.53
UBE4B-210ENST00000488228 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
UBE4B-210ENST00000488228 DNAJC12Q9UKB3 198 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 CLUHO75153 1309 aa11.74□□□□□ -0.53
UBE4B-210ENST00000488228 LRRC10BA6NIK2 292 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 F8VP50 259 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 RNF225M0QZC1 329 aaPredicted RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 NRG2O14511 850 aaPredicted RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 NOL4O94818 638 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 POU2F2P09086 479 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 UCHL3P15374 230 aa11.73□□□□□ -0.53
UBE4B-210ENST00000488228 BRD2P25440 801 aaKnown RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 SSTR3P32745 418 aaPredicted RBP11.73□□□□□ -0.53
UBE4B-210ENST00000488228 USP8P40818 1118 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms