RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 CYP24A1Q07973 514 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 FCHO2Q0JRZ9 810 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 ARHGAP29Q52LW3 1261 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 ATL3Q6DD88 541 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 ZC3H14Q6PJT7 736 aaKnown RBP12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 TXNDC11Q6PKC3 985 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 TMEM150AQ86TG1 271 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 WDR49Q8IV35 697 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 DCLK2Q8N568 766 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 KBTBD7Q8WVZ9 684 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 ZNF516Q92618 1163 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 PAGE5Q96GU1 130 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 SPATA32Q96LK8 384 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 PKMYT1Q99640 499 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 CGRRF1Q99675 332 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 KIAA1586Q9HCI6 787 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 TRPV5Q9NQA5 729 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 CCL26Q9Y258 94 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 ZDHHC9Q9Y397 364 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 UBE4BO95155 1302 aa12.11□□□□□ -0.47
NIPAL3-207ENST00000488155 CEP250Q9BV73 2442 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 GON4LQ3T8J9 2241 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 ABCA7Q8IZY2 2146 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 PVALEFA0A1B0GWK0 134 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 SPECC1L-ADORA2AF8WAN1 911 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 GABRDO14764 452 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 ACTN4O43707 911 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 EXOC3O60645 756 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 KINO60870 393 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 SLFN14P0C7P3 912 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 CHRNB1P11230 501 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 PFKFB1P16118 471 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 BDNFP23560 247 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 AVPR1AP37288 418 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 RPS9P46781 194 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 RPL10AP62906 217 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 CYP27A1Q02318 531 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 STK4Q13043 487 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 TRPC3Q13507 836 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 PSMD6Q15008 389 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 PON2Q15165 354 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 KNOP1Q1ED39 458 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 TRIM68Q6AZZ1 485 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 CMTM8Q8IZV2 173 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 OR6B3Q8NGW1 331 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 LEO1Q8WVC0 666 aaPredicted RBP12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 MRPS31Q92665 395 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 MYLPFQ96A32 169 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 MRPL45Q9BRJ2 306 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 CHRDQ9H2X0 955 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 TRPC7Q9HCX4 862 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 CRTAC1Q9NQ79 661 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 GKN1Q9NS71 199 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 MAGEC2Q9UBF1 373 aaPredicted RBP12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 NXF1Q9UBU9 619 aaKnown RBP12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 FBXO4Q9UKT5 387 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 NME7Q9Y5B8 376 aa12.1□□□□□ -0.47
NIPAL3-207ENST00000488155 KIAA1549LQ6ZVL6 1849 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 PHACTR2O75167 634 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 TADA3O75528 432 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 CTHP32929 405 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 GNL1P36915 607 aaPredicted RBP12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 GRIK1P39086 918 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 MYL6P60660 151 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 TNNC1P63316 161 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 KRT85P78386 507 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 GAS6Q14393 721 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 BMT2Q1RMZ1 405 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 WDR72Q3MJ13 1102 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 MDH1BQ5I0G3 518 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 WDR44Q5JSH3 913 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 FAM171BQ6P995 826 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 DPH6Q7L8W6 267 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 CELF5Q8N6W0 485 aaKnown RBP12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 KIAA0895Q8NCT3 520 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 RIN3Q8TB24 985 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 PLEKHO2Q8TD55 490 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 USP13Q92995 863 aaPredicted RBP12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 SLC22A12Q96S37 553 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 CYP2S1Q96SQ9 504 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 GZF1Q9H116 711 aaPredicted RBP12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 SNX25Q9H3E2 840 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 SEMA4AQ9H3S1 761 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 EBF3Q9H4W6 596 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 ABCB6Q9NP58 842 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 EXOC1Q9NV70 894 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 OBP2AQ9NY56 170 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 CDH9Q9ULB4 789 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 THADAQ6YHU6 1953 aa12.09□□□□□ -0.47
NIPAL3-207ENST00000488155 NOL4O94818 638 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 PRR29P0C7W0 189 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 WARSP23381 471 aaKnown RBP12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 CMA1P23946 247 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 HOXC13P31276 330 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 SATB1Q01826 763 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 IFRD2Q12894 506 aaPredicted RBP12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 BIRC3Q13489 604 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms