RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SV2AQ7L0J3 742 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 FUBP3Q96I24 572 aaKnown RBP eCLIP25.34■■□□□ 1.65
RNF38-208ENST00000488058 SHDQ96IW2 340 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 NME7Q9Y5B8 376 aa25.34■■□□□ 1.65
RNF38-208ENST00000488058 HEPACAM2A8MVW5 462 aa25.33■■□□□ 1.65
RNF38-208ENST00000488058 MAPK13O15264 365 aa25.33■■□□□ 1.65
RNF38-208ENST00000488058 HMGA1P17096 107 aaKnown RBP25.33■■□□□ 1.65
RNF38-208ENST00000488058 PSMC3P17980 439 aa25.33■■□□□ 1.65
RNF38-208ENST00000488058 BDNFP23560 247 aa25.33■■□□□ 1.65
RNF38-208ENST00000488058 GDI1P31150 447 aa25.33■■□□□ 1.65
RNF38-208ENST00000488058 ZCWPW2Q504Y3 356 aa25.33■■□□□ 1.65
RNF38-208ENST00000488058 INTS8Q75QN2 995 aaKnown RBP25.33■■□□□ 1.65
RNF38-208ENST00000488058 ARID3BQ8IVW6 561 aaPredicted RBP25.33■■□□□ 1.65
RNF38-208ENST00000488058 NUP210Q8TEM1 1887 aaPredicted RBP25.33■■□□□ 1.65
RNF38-208ENST00000488058 DEPDC1BQ8WUY9 529 aa25.33■■□□□ 1.65
RNF38-208ENST00000488058 EEF2KMTQ96G04 330 aa25.33■■□□□ 1.65
RNF38-208ENST00000488058 DPEP3Q9H4B8 488 aa25.33■■□□□ 1.65
RNF38-208ENST00000488058 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.33■■□□□ 1.652e-7■■■■■ 106.2
RNF38-208ENST00000488058 NCANO14594 1321 aa25.33■■□□□ 1.64
RNF38-208ENST00000488058 SLC38A8A6NNN8 435 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 DPYSL4O14531 572 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 IKBKBO14920 756 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 GALR2O43603 387 aaPredicted RBP25.32■■□□□ 1.64
RNF38-208ENST00000488058 FAM163BP0C2L3 166 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 CDH8P55286 799 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 NHLH1Q02575 133 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 TCF15Q12870 199 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 EDRF1Q3B7T1 1238 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 C1orf220Q5T0J3 134 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 ISM2Q6H9L7 571 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 PHLDB3Q6NSJ2 640 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 YAF2Q8IY57 180 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 MYCBPAPQ8TBZ2 947 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 PCED1BQ96HM7 432 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 TSG101Q99816 390 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 MKNK1Q9BUB5 465 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 FOXQ1Q9C009 403 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 TASP1Q9H6P5 420 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 VRTNQ9H8Y1 702 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 TRPV4Q9HBA0 871 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 OBSL1O75147 1896 aa25.32■■□□□ 1.64
RNF38-208ENST00000488058 HLA-DRAP01903 254 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 PTPN1P18031 435 aaKnown RBP25.31■■□□□ 1.64
RNF38-208ENST00000488058 GRIK1P39086 918 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 MAGEA11P43364 429 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 GCLMP48507 274 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 NUBP1P53384 320 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 NLRP12P59046 1061 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 SGSM1Q2NKQ1 1148 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 TPRG1Q6ZUI0 275 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 E2F7Q96AV8 911 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 RSPRY1Q96DX4 576 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 HEBP1Q9NRV9 189 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 CHMP5Q9NZZ3 219 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 PTPRDP23468 1912 aa25.31■■□□□ 1.64
RNF38-208ENST00000488058 DENND4CQ5VZ89 1909 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 TICRRQ7Z2Z1 1910 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 H0Y858 1186 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 ZNF263O14978 683 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 CETN3O15182 167 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 F11P03951 625 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 DCNP07585 359 aaKnown RBP25.3■■□□□ 1.64
RNF38-208ENST00000488058 P4HA1P13674 534 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 ANXA13P27216 316 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 ANP32AP39687 249 aaKnown RBP25.3■■□□□ 1.64
RNF38-208ENST00000488058 STARD6P59095 220 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 PRKCQQ04759 706 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 UBXN2BQ14CS0 331 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 SPOPLQ6IQ16 392 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 MFSD6LQ8IWD5 586 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 MRPS31Q92665 395 aaKnown RBP25.3■■□□□ 1.64
RNF38-208ENST00000488058 IRF7Q92985 503 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 SMG9Q9H0W8 520 aaKnown RBP25.3■■□□□ 1.64
RNF38-208ENST00000488058 UXTQ9UBK9 157 aaPredicted RBP25.3■■□□□ 1.64
RNF38-208ENST00000488058 SIT1Q9Y3P8 196 aa25.3■■□□□ 1.64
RNF38-208ENST00000488058 NOL4O94818 638 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 EPB41P11171 864 aaKnown RBP25.29■■□□□ 1.64
RNF38-208ENST00000488058 CD72P21854 359 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 PPP3CAQ08209 521 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 VSTM1Q6UX27 236 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 TMEM150AQ86TG1 271 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 MAB21L3Q8N8X9 362 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 B3GALNT2Q8NCR0 500 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 SPATA20Q8TB22 786 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 DNASE1L2Q92874 299 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 SLC46A2Q9BY10 475 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 IMPG2Q9BZV3 1241 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 SDCBP2Q9H190 292 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 MIA3Q5JRA6 1907 aa25.29■■□□□ 1.64
RNF38-208ENST00000488058 ZNF638Q14966 1978 aaKnown RBP25.29■■□□□ 1.64
RNF38-208ENST00000488058 KANSL1LA0AUZ9 987 aa25.28■■□□□ 1.64
RNF38-208ENST00000488058 PRAMEF12O95522 483 aa25.28■■□□□ 1.64
RNF38-208ENST00000488058 TXNDC8Q6A555 127 aa25.28■■□□□ 1.64
RNF38-208ENST00000488058 CCDC105Q8IYK2 499 aa25.28■■□□□ 1.64
RNF38-208ENST00000488058 DTWD2Q8NBA8 298 aa25.28■■□□□ 1.64
RNF38-208ENST00000488058 PJA1Q8NG27 643 aa25.28■■□□□ 1.64
RNF38-208ENST00000488058 TAF4BQ92750 862 aa25.28■■□□□ 1.64
RNF38-208ENST00000488058 GTPBP4Q9BZE4 634 aaKnown RBP25.28■■□□□ 1.64
RNF38-208ENST00000488058 FAM86C1Q9NVL1 165 aa25.28■■□□□ 1.64
RNF38-208ENST00000488058 MAN1B1Q9UKM7 699 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms