RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 ATP2C2O75185 946 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PRPF40AO75400 957 aaKnown RBP12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DLATP10515 647 aaKnown RBP12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CCNE1P24864 410 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 LMO2P25791 158 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PCSK1P29120 753 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CTHP32929 405 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MLLT6P55198 1093 aaPredicted RBP12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SNRPFP62306 86 aaKnown RBP12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TNK2Q07912 1038 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MYO1EQ12965 1108 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 STK4Q13043 487 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 GAS6Q14393 721 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DDR2Q16832 855 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DUOXA2Q1HG44 320 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ARHGAP15Q53QZ3 475 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 FAM171BQ6P995 826 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZC3H14Q6PJT7 736 aaKnown RBP12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 HS2ST1Q7LGA3 356 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CMTM8Q8IZV2 173 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ADSSL1Q8N142 457 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 XXYLT1Q8NBI6 393 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 RDH13Q8NBN7 331 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 FAM3CQ92520 227 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZNF516Q92618 1163 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PAGE5Q96GU1 130 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 FUBP3Q96I24 572 aaKnown RBP eCLIP12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 NELL2Q99435 816 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SYT15Q9BQS2 421 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 XYLT2Q9H1B5 865 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 KCTD10Q9H3F6 313 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TMEM30AQ9NV96 361 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 GTSE1Q9NYZ3 720 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MRPS17Q9Y2R5 130 aaKnown RBP12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 GTF3C3Q9Y5Q9 886 aa12.02□□□□□ -0.49
RAB11FIP3-210ENST00000487899 FAM237AA0A1B0GTK4 181 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SPECC1L-ADORA2AF8WAN1 911 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MAN2B1O00754 1011 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 LAMTOR5O43504 91 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 LMNAP02545 664 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CSH1P0DML2 217 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CSH2P0DML3 217 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CHRNB1P11230 501 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 WARSP23381 471 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CMA1P23946 247 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 LHX1P48742 406 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CASP4P49662 377 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 USP4Q13107 963 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 KNOP1Q1ED39 458 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 KMT5BQ4FZB7 885 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ARHGAP29Q52LW3 1261 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TDRD10Q5VZ19 366 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TXNDC8Q6A555 127 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TSSK4Q6SA08 328 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DPH6Q7L8W6 267 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CEP57L1Q8IYX8 460 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SUMF1Q8NBK3 374 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZBTB44Q8NCP5 570 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 BPIFB1Q8TDL5 484 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 USP13Q92995 863 aaPredicted RBP12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CCDC127Q96BQ5 260 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MSANTD3Q96H12 275 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MYRFLQ96LU7 910 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SLC22A12Q96S37 553 aa12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MRPL45Q9BRJ2 306 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CGNQ9P2M7 1197 aaKnown RBP12.01□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PLXND1Q9Y4D7 1925 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 LRRIQ3A6PVS8 624 aaPredicted RBP12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 LILRB5O75023 590 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 STAU1O95793 577 aaKnown RBP12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CST3P01034 146 aaPredicted RBP12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TNNI1P19237 187 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DDX6P26196 483 aaKnown RBP eCLIP12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MAGEA11P43364 429 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CACNA2D1P54289 1103 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CLDN10P78369 228 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 KRT85P78386 507 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 FOXK2Q01167 660 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CCINQ13939 588 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 Q6ZS52 159 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SPATA2LQ8IUW3 424 aaPredicted RBP12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 YAF2Q8IY57 180 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MAB21L3Q8N8X9 362 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CSGALNACT1Q8TDX6 532 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 TMEM174Q8WUU8 243 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 PCED1BQ96HM7 432 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SPATA32Q96LK8 384 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 FNBP1Q96RU3 617 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 FAM83CQ9BQN1 747 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 IER2Q9BTL4 223 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 SEMA4AQ9H3S1 761 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DPEP3Q9H4B8 488 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 HPS4Q9NQG7 708 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 RBM12Q9NTZ6 932 aaKnown RBP12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 EXOC1Q9NV70 894 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 DMAC2Q9NW81 257 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 ZMYM5Q9UJ78 669 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 CDH9Q9ULB4 789 aa12□□□□□ -0.49
RAB11FIP3-210ENST00000487899 MAGED2Q9UNF1 606 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms