RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 CHMLP26374 656 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 ADD1P35611 737 aaKnown RBP12.71□□□□□ -0.37
TRIM56-204ENST00000487252 GRM5P41594 1212 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 AARSP49588 968 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRIM56-204ENST00000487252 RARRES1P49788 294 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 NLRP12P59046 1061 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 FAM160A1Q05DH4 1040 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 MESP2Q0VG99 397 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 USP4Q13107 963 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 NR1H3Q13133 447 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 PREPLQ4J6C6 727 aaPredicted RBP12.71□□□□□ -0.37
TRIM56-204ENST00000487252 EOGTQ5NDL2 527 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 TXNDC8Q6A555 127 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 DHRS13Q6UX07 377 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 ZBTB8OSQ8IWT0 167 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 EFCAB13Q8IY85 973 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 SNRNP27Q8WVK2 155 aaKnown RBP12.71□□□□□ -0.37
TRIM56-204ENST00000487252 FGF11Q92914 225 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 C18orf25Q96B23 403 aaPredicted RBP12.71□□□□□ -0.37
TRIM56-204ENST00000487252 C2orf40Q9H1Z8 148 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 GPRC5CQ9NQ84 441 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 TOPORSQ9NS56 1045 aaPredicted RBP12.71□□□□□ -0.37
TRIM56-204ENST00000487252 CNTN3Q9P232 1028 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 DDX25Q9UHL0 483 aaKnown RBP12.71□□□□□ -0.37
TRIM56-204ENST00000487252 BTBD3Q9Y2F9 522 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 NFE2L3Q9Y4A8 694 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 WNT6Q9Y6F9 365 aa12.71□□□□□ -0.37
TRIM56-204ENST00000487252 CITO14578 2027 aa12.71□□□□□ -0.38
TRIM56-204ENST00000487252 KNL1Q8NG31 2342 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 GOLGA8AA7E2F4 631 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 GOLGA8BA8MQT2 603 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 GNSP15586 552 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 HMGA1P17096 107 aaKnown RBP12.7□□□□□ -0.38
TRIM56-204ENST00000487252 GABRG2P18507 467 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 MARCKSP29966 332 aaPredicted RBP12.7□□□□□ -0.38
TRIM56-204ENST00000487252 NMT1P30419 496 aaKnown RBP12.7□□□□□ -0.38
TRIM56-204ENST00000487252 ADSSP30520 456 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 TUFMP49411 452 aaKnown RBP12.7□□□□□ -0.38
TRIM56-204ENST00000487252 BNC1Q01954 994 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 C6orf118Q5T5N4 469 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 CEP120Q8N960 986 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 CCDC148Q8NFR7 591 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 DNASE2BQ8WZ79 361 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 HAS1Q92839 578 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 HSD17B14Q9BPX1 270 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 GAREM1Q9H706 876 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 KCNK4Q9NYG8 393 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 CALCOCO1Q9P1Z2 691 aa12.7□□□□□ -0.38
TRIM56-204ENST00000487252 MYLKQ15746 1914 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 GOLGA8CPA6NN73 597 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 CER1O95813 267 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 TCF3P15923 654 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 IFNAR2P48551 515 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 EXOSC10Q01780 885 aaKnown RBP12.69□□□□□ -0.38
TRIM56-204ENST00000487252 KCNH2Q12809 1159 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 VEPH1Q14D04 833 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 NT5DC1Q5TFE4 455 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 EMC10Q5UCC4 262 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 ERICH1Q86X53 443 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 PGBD3Q8N328 593 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 ZNF513Q8N8E2 541 aaPredicted RBP12.69□□□□□ -0.38
TRIM56-204ENST00000487252 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 SLKQ9H2G2 1235 aaPredicted RBP12.69□□□□□ -0.38
TRIM56-204ENST00000487252 LINC00597Q9H2U6 94 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 CD248Q9HCU0 757 aa12.69□□□□□ -0.38
TRIM56-204ENST00000487252 TIMM13Q9Y5L4 95 aaPredicted RBP12.69□□□□□ -0.38
TRIM56-204ENST00000487252 FBN2P35556 2912 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 A0A1B0GTW7 788 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 SLC27A2O14975 620 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 ZNF217O75362 1048 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 GSPT1P15170 499 aaKnown RBP12.68□□□□□ -0.38
TRIM56-204ENST00000487252 TIE1P35590 1138 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 CCR10P46092 362 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 YARSP54577 528 aaKnown RBP12.68□□□□□ -0.38
TRIM56-204ENST00000487252 BECN1Q14457 450 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 HLA-BQ31612 363 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 SYCP2LQ5T4T6 812 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 ATF7IP2Q5U623 682 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 PPP4R3AQ6IN85 833 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 IL27RAQ6UWB1 636 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 TPH2Q8IWU9 490 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 RGL4Q8IZJ4 473 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 BSNDQ8WZ55 320 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 FOXJ1Q92949 421 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 PTPRHQ9HD43 1115 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 SH3GLB2Q9NR46 395 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 AK5Q9Y6K8 562 aa12.68□□□□□ -0.38
TRIM56-204ENST00000487252 UTP20O75691 2785 aaKnown RBP12.67□□□□□ -0.38
TRIM56-204ENST00000487252 ANAPC1Q9H1A4 1944 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 ENO4A6NNW6 628 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 TADA3O75528 432 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 MAOBP27338 520 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 EIF2DP41214 584 aaKnown RBP12.67□□□□□ -0.38
TRIM56-204ENST00000487252 MATKP42679 507 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 CCDC173Q0VFZ6 552 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 SERINC3Q13530 473 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 TMEM132AQ24JP5 1023 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 WDR45BQ5MNZ6 344 aa12.67□□□□□ -0.38
TRIM56-204ENST00000487252 ZNF574Q6ZN55 896 aaPredicted RBP12.67□□□□□ -0.38
TRIM56-204ENST00000487252 PRICKLE2Q7Z3G6 844 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms