RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 MYBPC3Q14896 1274 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 PPP2R5AQ15172 486 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 NFE2Q16621 373 aaPredicted RBP7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 FSCN1Q16658 493 aaKnown RBP7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 ZBTB41Q5SVQ8 909 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 GPATCH4Q5T3I0 446 aaKnown RBP7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 PHF19Q5T6S3 580 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 CCDC62Q6P9F0 684 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 CCDC174Q6PII3 467 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 GPR142Q7Z601 462 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 CATIPQ7Z7H3 387 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 SRBD1Q8N5C6 995 aaKnown RBP7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 DTX3Q8N9I9 347 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 FANCBQ8NB91 859 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 NUP133Q8WUM0 1156 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 USP6NLQ92738 828 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 ZSWIM3Q96MP5 696 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 MAP3K14Q99558 947 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 RANBP17Q9H2T7 1088 aaKnown RBP7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 JMJD4Q9H9V9 463 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 CCM2LQ9NUG4 571 aaPredicted RBP7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 ZIM2Q9NZV7 527 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 SRRDQ9UH36 339 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 EDARQ9UNE0 448 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 PTPN22Q9Y2R2 807 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 MRFAP1Q9Y605 127 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 DCHS1Q96JQ0 3298 aa7.09□□□□□ -1.27
RTFDC1-209ENST00000487211 MYH4Q9Y623 1939 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 KLF18A0A0U1RQI7 1052 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 E2F8A0AVK6 867 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 PRSS38A1L453 326 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 TNPO2O14787 897 aaKnown RBP7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 N4BP3O15049 544 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 XPOTO43592 962 aaKnown RBP7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 SEMA7AO75326 666 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 SNUPNO95149 360 aaKnown RBP7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 RBP3P10745 1247 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 MAPK4P31152 587 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 FLT3LGP49771 235 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 MRE11P49959 708 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 EVCP57679 992 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 CCNA1P78396 465 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 PRKCZQ05513 592 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 UGT8Q16880 541 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 ASPRV1Q53RT3 343 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 MUM1L1Q5H9M0 696 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 SNRNP48Q6IEG0 339 aaKnown RBP7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 KIAA1841Q6NSI8 718 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 APOA5Q6Q788 366 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 UNQ6494/PRO21346Q6UXR6 183 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 PLEKHH3Q7Z736 793 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 IGDCC3Q8IVU1 814 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 FBXO15Q8NCQ5 510 aaPredicted RBP7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 TBC1D5Q92609 795 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 GUCD1Q96NT3 240 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 GORASP1Q9BQQ3 440 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 C22orf23Q9BZE7 217 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 SLC13A1Q9BZW2 595 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 QRSL1Q9H0R6 528 aaKnown RBP7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 RIOX1Q9H6W3 641 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 PCDH18Q9HCL0 1135 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 PDRG1Q9NUG6 133 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 DNAJC28Q9NX36 388 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 IP6K2Q9UHH9 426 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 LUC7L2Q9Y383 392 aaKnown RBP7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 CYP46A1Q9Y6A2 500 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 DOCK3Q8IZD9 2030 aa7.08□□□□□ -1.28
RTFDC1-209ENST00000487211 ZBTB43O43298 467 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 STRNO43815 780 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 EIF5BO60841 1220 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 PLEKHA8P1O95397 391 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 SLC25A27O95847 323 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 ICAM1P05362 532 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 LPLP06858 475 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 ALAS1P13196 640 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 CYP2B6P20813 491 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 HOXD10P28358 340 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 PDIA3P30101 505 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 OAZ1P54368 228 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 ITGA1P56199 1179 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 GRB14Q14449 540 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 NOLC1Q14978 699 aaKnown RBP eCLIP7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 ARHGEF6Q15052 776 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 ACAP2Q15057 778 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 LRRC41Q15345 812 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 PKN2Q16513 984 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 QRICH1Q2TAL8 776 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 TOR2AQ5JU69 321 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 WDR78Q5VTH9 848 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 FBXO46Q6PJ61 603 aaPredicted RBP7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 CCAR1Q8IX12 1150 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 SHCBP1Q8NEM2 672 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 PIBF1Q8WXW3 757 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 COA7Q96BR5 231 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 CLIC6Q96NY7 704 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 PIGSQ96S52 555 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 TACO1Q9BSH4 297 aaKnown RBP7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 BTBD2Q9BX70 525 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 TEX13BQ9BXU2 312 aa7.07□□□□□ -1.28
RTFDC1-209ENST00000487211 ALDH8A1Q9H2A2 487 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms