RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 ACTL7BQ9Y614 415 aa18.93■□□□□ 0.62
PDLIM7-207ENST00000486828 ITGB3P05106 788 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 GHRP10912 638 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 INSRRP14616 1297 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 BRAFP15056 766 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 ATICP31939 592 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 IGBP1P78318 339 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 ARHGAP1Q07960 439 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 ZNF268Q14587 947 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 AMHR2Q16671 573 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 HADHQ16836 314 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 CCDC142Q17RM4 750 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 CYP4F22Q6NT55 531 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 PAXIP1Q6ZW49 1069 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 XYLT1Q86Y38 959 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 MGARPQ8TDB4 240 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 CPXM1Q96SM3 734 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 FRMD8P1Q9BZ68 369 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 SMYD3Q9H7B4 428 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 VRTNQ9H8Y1 702 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 ZWILCHQ9H900 591 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 CILPO75339 1184 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 PECAM1P16284 738 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 PTPN11Q06124 597 aaPredicted RBP18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 LAMC2Q13753 1193 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 LRRC14Q15048 493 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 SPRED3Q2MJR0 410 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 RNASEH2BQ5TBB1 312 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 ARMCX2Q7L311 632 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 LINC01465Q8N7H1 131 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 TWNKQ96RR1 684 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 ELOVL4Q9GZR5 314 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 PDZD7Q9H5P4 517 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 ASB7Q9H672 318 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 CYP3A43Q9HB55 503 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 KCNK9Q9NPC2 374 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 METTL5Q9NRN9 209 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 SHOC2Q9UQ13 582 aa18.92■□□□□ 0.62
PDLIM7-207ENST00000486828 A0A087WZ62 844 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 FOXO6A8MYZ6 492 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 DNM1LO00429 736 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 MAGEB2O15479 319 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 ERBB2P04626 1255 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 LGALS2P05162 132 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 IL1R2P27930 398 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 PLCB3Q01970 1234 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 ORC1Q13415 861 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 TAZQ16635 292 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 KIAA0319LQ8IZA0 1049 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 TMEM130Q8N3G9 435 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 TMEM176AQ96HP8 235 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 ELAC2Q9BQ52 826 aaKnown RBP18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 FDXACB1Q9BRP7 624 aaPredicted RBP18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 TMEM121Q9BTD3 319 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 SYNCQ9H7C4 482 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 HMGXB4Q9UGU5 601 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 TBK1Q9UHD2 729 aa18.91■□□□□ 0.62
PDLIM7-207ENST00000486828 EVPLQ92817 2033 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 CCT8L1PA6NM43 557 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 SGK1O00141 431 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 MICAL2O94851 1124 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 ITGBL1O95965 494 aaPredicted RBP18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 KDELR1P24390 212 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 GABRB2P47870 512 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 SMTNL2Q2TAL5 461 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 BBS12Q6ZW61 710 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 ANKRD42Q8N9B4 389 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 TTC13Q8NBP0 860 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 CKAP2Q8WWK9 683 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 CSDE1O75534 798 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 TOMM70O94826 608 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 P4HA1P13674 534 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 OTUD4Q01804 1114 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 MPP2Q14168 576 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 KYAT1Q16773 422 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 SRRM1Q8IYB3 904 aaKnown RBP18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 EMC1Q8N766 993 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 MCRS1Q96EZ8 462 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 EFCC1Q9HA90 598 aa18.9■□□□□ 0.62
PDLIM7-207ENST00000486828 EXOC1LA0A1B0GW35 172 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 CST8O60676 142 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 GH1P01241 217 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 HNRNPH1P31943 449 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 SCTRP47872 440 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 ACAP1Q15027 740 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 SLC10A6Q3KNW5 377 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 KCNT1Q5JUK3 1230 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 TAPT1Q6NXT6 567 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 ARHGEF18Q6ZSZ5 1173 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 PCGF5Q86SE9 256 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 TAX1BP1Q86VP1 789 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 TDRPQ86YL5 185 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 ACTL9Q8TC94 416 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 MAML1Q92585 1016 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 PRCCQ92733 491 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 CPB2Q96IY4 423 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 AKT3Q9Y243 479 aa18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.89■□□□□ 0.61
PDLIM7-207ENST00000486828 COL1A2P08123 1366 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms