RNA–Protein interactions for RNA: ENST00000486260.5

THBS3-207, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 1,763 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-207ENST00000486260 DDX3XO00571 662 aaKnown RBP eCLIP17.53■□□□□ 0.4
THBS3-207ENST00000486260 MICAL2O94851 1124 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 CPB1P15086 417 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 OR1D2P34982 312 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 MTF1Q14872 753 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 ASTE1Q2TB18 679 aaPredicted RBP17.53■□□□□ 0.4
THBS3-207ENST00000486260 LRIT3Q3SXY7 679 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 PLPP4Q5VZY2 271 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 LCLAT1Q6UWP7 414 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 PAQR9Q6ZVX9 377 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 PALB2Q86YC2 1186 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 PASD1Q8IV76 773 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 GPR65Q8IYL9 337 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 FUKQ8N0W3 1084 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 CCDC112Q8NEF3 446 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 PCDHB18PQ96TA0 734 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 HNRNPABQ99729 332 aaKnown RBP17.53■□□□□ 0.4
THBS3-207ENST00000486260 MED10Q9BTT4 135 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 SSX2IPQ9Y2D8 614 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 PCDHGC5Q9Y5F6 944 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 FAM170AA1A519 330 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 EPOPA6NHQ4 379 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 AKR1B10O60218 316 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 STILQ15468 1287 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 MAPRE1Q15691 268 aaKnown RBP17.53■□□□□ 0.4
THBS3-207ENST00000486260 GOLGA7BQ2TAP0 167 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 SLC8B1Q6J4K2 584 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 DENND1BQ6P3S1 775 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 RAD9BQ6WBX8 426 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 VPS36Q86VN1 386 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 UBA3Q8TBC4 463 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 MICAL1Q8TDZ2 1067 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 PGLYRP2Q96PD5 576 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 ZNF518BQ9C0D4 1074 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.53■□□□□ 0.4
THBS3-207ENST00000486260 PCDHGC3Q9UN70 934 aa17.53■□□□□ 0.4
THBS3-207ENST00000486260 A0A087X0T9 212 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.52■□□□□ 0.4
THBS3-207ENST00000486260 M0QYV0 167 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 FAM228BP0C875 321 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 IRS1P35568 1242 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 KIF11P52732 1056 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 ROR1Q01973 937 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 GFPT1Q06210 699 aaPredicted RBP17.52■□□□□ 0.4
THBS3-207ENST00000486260 GPR17Q13304 367 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 SMC1AQ14683 1233 aaKnown RBP17.52■□□□□ 0.4
THBS3-207ENST00000486260 BMS1Q14692 1282 aaKnown RBP17.52■□□□□ 0.4
THBS3-207ENST00000486260 RNF19BQ6ZMZ0 732 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 TTC30AQ86WT1 665 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 SLC30A5Q8TAD4 765 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 GDPD5Q8WTR4 605 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 RHOBTB2Q9BYZ6 727 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 RXFP1Q9HBX9 757 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 SPTLC3Q9NUV7 552 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 FNIP2Q9P278 1114 aa17.52■□□□□ 0.4
THBS3-207ENST00000486260 CDH23Q9H251 3354 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 WDR27A2RRH5 827 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 HIDE1A8MVS5 230 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 RFXAPO00287 272 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 FSCN2O14926 492 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 TEX28O15482 410 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 NRDCO43847 1150 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 CNPP09543 421 aaKnown RBP17.51■□□□□ 0.39
THBS3-207ENST00000486260 BDNFP23560 247 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 NFE2Q16621 373 aaPredicted RBP17.51■□□□□ 0.39
THBS3-207ENST00000486260 FAM35AQ86V20 835 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 SPATA2LQ8IUW3 424 aaPredicted RBP17.51■□□□□ 0.39
THBS3-207ENST00000486260 CCDC170Q8IYT3 715 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 MRPL43Q8N983 215 aaKnown RBP17.51■□□□□ 0.39
THBS3-207ENST00000486260 NGRNQ9NPE2 291 aaKnown RBP17.51■□□□□ 0.39
THBS3-207ENST00000486260 ABI2Q9NYB9 513 aaPredicted RBP17.51■□□□□ 0.39
THBS3-207ENST00000486260 C2orf71A6NGG8 1288 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 CREMQ03060 361 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 SLC18A3Q16572 532 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 PRPF38BQ5VTL8 546 aaKnown RBP17.51■□□□□ 0.39
THBS3-207ENST00000486260 C4orf50Q6ZRC1 276 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 WDTC1Q8N5D0 677 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 ANKRD52Q8NB46 1076 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 ATAD1Q8NBU5 361 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 LHX5Q9H2C1 402 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 HESX1Q9UBX0 185 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 IRAK3Q9Y616 596 aa17.51■□□□□ 0.39
THBS3-207ENST00000486260 EPN1Q9Y6I3 576 aaPredicted RBP17.51■□□□□ 0.39
THBS3-207ENST00000486260 MTMR11A4FU01 709 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 TMCO5BA8MYB1 307 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 ARHGAP6O43182 974 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 VNN2O95498 520 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 CYP1A1P04798 512 aaPredicted RBP17.5■□□□□ 0.39
THBS3-207ENST00000486260 ANXA13P27216 316 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 CYLC1P35663 651 aaPredicted RBP17.5■□□□□ 0.39
THBS3-207ENST00000486260 NDUFV1P49821 464 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 CACNA2D1P54289 1103 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 RAB33AQ14088 237 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 CLEC16AQ2KHT3 1053 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 PKDCCQ504Y2 493 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 TRIM72Q6ZMU5 477 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 DNAAF5Q86Y56 855 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 CPA5Q8WXQ8 436 aa17.5■□□□□ 0.39
THBS3-207ENST00000486260 SECISBP2LQ93073 1101 aaKnown RBP17.5■□□□□ 0.39
THBS3-207ENST00000486260 KLHL5Q96PQ7 755 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms