RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 RAB15P59190 212 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 LILRA4P59901 499 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 NOP14P78316 857 aaKnown RBP6.03□□□□□ -1.44
COPS3-208ENST00000486032 APBA1Q02410 837 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 ARHGAP44Q17R89 818 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 EXOC3L4Q17RC7 722 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 SGSM1Q2NKQ1 1148 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 WDR72Q3MJ13 1102 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 FAM171A1Q5VUB5 890 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 PLPP4Q5VZY2 271 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 GJB7Q6PEY0 223 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 PRSS55Q6UWB4 352 aaPredicted RBP6.03□□□□□ -1.44
COPS3-208ENST00000486032 CD300LGQ6UXG3 332 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 RRAGAQ7L523 313 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 TMC7Q7Z402 723 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 METTL23Q86XA0 190 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 ARHGEF19Q8IW93 802 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 VPS52Q8N1B4 723 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 MICALL1Q8N3F8 863 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 PPM1KQ8N3J5 372 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 OR6B3Q8NGW1 331 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 FEZF2Q8TBJ5 459 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 RIN2Q8WYP3 895 aaPredicted RBP6.03□□□□□ -1.44
COPS3-208ENST00000486032 RSPH1Q8WYR4 309 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 CLP1Q92989 425 aaKnown RBP6.03□□□□□ -1.44
COPS3-208ENST00000486032 KAT5Q92993 513 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 IGSF21Q96ID5 467 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 SENP8Q96LD8 212 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 NAP1L5Q96NT1 182 aaPredicted RBP6.03□□□□□ -1.44
COPS3-208ENST00000486032 NT5C1BQ96P26 610 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 TSPAN18Q96SJ8 248 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 GPR62Q9BZJ7 368 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 TRIM5Q9C035 493 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 XPO4Q9C0E2 1151 aaKnown RBP6.03□□□□□ -1.44
COPS3-208ENST00000486032 INTS2Q9H0H0 1204 aaKnown RBP6.03□□□□□ -1.44
COPS3-208ENST00000486032 ZNF576Q9H609 170 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 APOBEC3GQ9HC16 384 aaKnown RBP6.03□□□□□ -1.44
COPS3-208ENST00000486032 ENTPD7Q9NQZ7 604 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 PUF60Q9UHX1 559 aaKnown RBP6.03□□□□□ -1.44
COPS3-208ENST00000486032 RWDD3Q9Y3V2 267 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 PCDHGC5Q9Y5F6 944 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 XIRP2A4UGR9 3374 aa6.03□□□□□ -1.44
COPS3-208ENST00000486032 SF3B1O75533 1304 aaKnown RBP eCLIP6.02□□□□□ -1.45
COPS3-208ENST00000486032 UNC80Q8N2C7 3258 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 GOLGA6L3A6NEY3 463 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 LGALS16A8MUM7 142 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 ERVH48-1M5A8F1 160 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 AP5Z1O43299 807 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 CBFA2T2O43439 604 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 TRAPPC3O43617 180 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 CXCL14O95715 111 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 URODP06132 367 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 PDGFRBP09619 1106 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 WEE2P0C1S8 567 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 ARAFP10398 606 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 ODC1P11926 461 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 P4HA1P13674 534 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 RPL17P18621 184 aaKnown RBP6.02□□□□□ -1.45
COPS3-208ENST00000486032 IGFBP4P22692 258 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 ACAT1P24752 427 aaKnown RBP6.02□□□□□ -1.45
COPS3-208ENST00000486032 DNAJB1P25685 340 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 ATICP31939 592 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 ERVK-21P61565 698 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 CLDN10P78369 228 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 ENPEPQ07075 957 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 ORC1Q13415 861 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 RAPGEF1Q13905 1077 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 SYCP1Q15431 976 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 CTXN3Q4LDR2 81 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 ZNF394Q53GI3 561 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 RTP2Q5QGT7 225 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 WSCD1Q658N2 575 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 C15orf39Q6ZRI6 1047 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 DPH6Q7L8W6 267 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 ADGRF2Q8IZF7 708 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 LRRC52Q8N7C0 313 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 APPL2Q8NEU8 664 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 NEK11Q8NG66 645 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 SPPL3Q8TCT6 385 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 CPLX3Q8WVH0 158 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 SAMD11Q96NU1 681 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 TCF25Q9BQ70 676 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 MRPL45Q9BRJ2 306 aaKnown RBP6.02□□□□□ -1.45
COPS3-208ENST00000486032 C11orf84Q9BUA3 381 aaPredicted RBP6.02□□□□□ -1.45
COPS3-208ENST00000486032 HERC2P3Q9BVR0 1158 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 VN1R3Q9BXE9 311 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 SNX25Q9H3E2 840 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 SMYD3Q9H7B4 428 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 UBE2TQ9NPD8 197 aaPredicted RBP6.02□□□□□ -1.45
COPS3-208ENST00000486032 NLRC4Q9NPP4 1024 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 FAM207AQ9NSI2 230 aaPredicted RBP6.02□□□□□ -1.45
COPS3-208ENST00000486032 ATXN7L1Q9ULK2 861 aaPredicted RBP6.02□□□□□ -1.45
COPS3-208ENST00000486032 L1RE1Q9UN81 338 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 TRANK1O15050 2925 aa6.02□□□□□ -1.45
COPS3-208ENST00000486032 VCANP13611 3396 aa6.01□□□□□ -1.45
COPS3-208ENST00000486032 A0A1B0GTH6 734 aa6.01□□□□□ -1.45
COPS3-208ENST00000486032 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.01□□□□□ -1.45
COPS3-208ENST00000486032 FAM170AA1A519 330 aa6.01□□□□□ -1.45
COPS3-208ENST00000486032 ARHGEF37A1IGU5 675 aa6.01□□□□□ -1.45
COPS3-208ENST00000486032 A8MXQ7 604 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms