RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 SMOC2Q9H3U7 446 aa7.51□□□□□ -1.21
VPS50-218ENST00000485994 DLGAP2Q9P1A6 1054 aa7.51□□□□□ -1.21
VPS50-218ENST00000485994 FBXL21Q9UKT6 434 aa7.51□□□□□ -1.21
VPS50-218ENST00000485994 CDH9Q9ULB4 789 aa7.51□□□□□ -1.21
VPS50-218ENST00000485994 SLC27A5Q9Y2P5 690 aa7.51□□□□□ -1.21
VPS50-218ENST00000485994 SNX9Q9Y5X1 595 aa7.51□□□□□ -1.21
VPS50-218ENST00000485994 PTPRJQ12913 1337 aa7.51□□□□□ -1.21
VPS50-218ENST00000485994 PTPRDP23468 1912 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 ANAPC1Q9H1A4 1944 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 PROB1E7EW31 1015 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 CHADO15335 359 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 PI15O43692 258 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 RNF40O75150 1001 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 F11P03951 625 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 CFHP08603 1231 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 KRT19P08727 400 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 HMGA1P17096 107 aaKnown RBP7.5□□□□□ -1.21
VPS50-218ENST00000485994 CEBPBP17676 345 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 PFKLP17858 780 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 PSMC3P17980 439 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 ATF6P18850 670 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 DDX6P26196 483 aaKnown RBP eCLIP7.5□□□□□ -1.21
VPS50-218ENST00000485994 RPL13P26373 211 aaKnown RBP7.5□□□□□ -1.21
VPS50-218ENST00000485994 GNL1P36915 607 aaPredicted RBP7.5□□□□□ -1.21
VPS50-218ENST00000485994 CYP2J2P51589 502 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 VCPP55072 806 aaKnown RBP7.5□□□□□ -1.21
VPS50-218ENST00000485994 FCHO2Q0JRZ9 810 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 BFSP1Q12934 665 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 VEPH1Q14D04 833 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 EDRF1Q3B7T1 1238 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 WDR72Q3MJ13 1102 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 ZACNQ401N2 412 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 FAM78AQ5JUQ0 283 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 C1orf228Q6PIY5 440 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 VSTM1Q6UX27 236 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 C4orf50Q6ZRC1 276 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 ADGRF2Q8IZF7 708 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 SIX5Q8N196 739 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 KIAA1958Q8N8K9 716 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 TMEM105Q8N8V8 129 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 FSIP1Q8NA03 581 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 PRSS33Q8NF86 280 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 PLEKHO2Q8TD55 490 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 TAF4BQ92750 862 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 IRF7Q92985 503 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 SYAP1Q96A49 352 aaPredicted RBP7.5□□□□□ -1.21
VPS50-218ENST00000485994 TRMT2BQ96GJ1 504 aaKnown RBP7.5□□□□□ -1.21
VPS50-218ENST00000485994 CHAMP1Q96JM3 812 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 SPATA17Q96L03 361 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 PGLYRP2Q96PD5 576 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 MKNK1Q9BUB5 465 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 TRMT61BQ9BVS5 477 aaKnown RBP7.5□□□□□ -1.21
VPS50-218ENST00000485994 PLA2G2FQ9BZM2 168 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 XYLT2Q9H1B5 865 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 GOLPH3LQ9H4A5 285 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 TASP1Q9H6P5 420 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 ARHGEF3Q9NR81 526 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 RYDENQ9NUL5 291 aaKnown RBP7.5□□□□□ -1.21
VPS50-218ENST00000485994 TMLHEQ9NVH6 421 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 DDX43Q9NXZ2 648 aaKnown RBP7.5□□□□□ -1.21
VPS50-218ENST00000485994 UXTQ9UBK9 157 aaPredicted RBP7.5□□□□□ -1.21
VPS50-218ENST00000485994 GTF3C4Q9UKN8 822 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 FRMD4BQ9Y2L6 1034 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 SIT1Q9Y3P8 196 aa7.5□□□□□ -1.21
VPS50-218ENST00000485994 FANCMQ8IYD8 2048 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 A0A1W2PRU2 124 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 KANSL1LA0AUZ9 987 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 GOLGA6L4A6NEF3 574 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 LRRIQ3A6PVS8 624 aaPredicted RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 MAN2B1O00754 1011 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 NCAM2O15394 837 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 MAP3K7O43318 606 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 NR3C1P04150 777 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 DLATP10515 647 aaKnown RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 MYL4P12829 197 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 LMO2P25791 158 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 GTF2H1P32780 548 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 RPS9P46781 194 aaKnown RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 PPP3CCP48454 512 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 COPS2P61201 443 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 FAM160A1Q05DH4 1040 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 FZD5Q13467 585 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 TRPC3Q13507 836 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 ZNF268Q14587 947 aaPredicted RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 TEAD2Q15562 447 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 MLF2Q15773 248 aaPredicted RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 SGSM1Q2NKQ1 1148 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 MGAT5BQ3V5L5 792 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 ZCWPW2Q504Y3 356 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 ARHGAP15Q53QZ3 475 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 LMBRD2Q68DH5 695 aaPredicted RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 FOXR2Q6PJQ5 311 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 INTS8Q75QN2 995 aaKnown RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 TMEM150AQ86TG1 271 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 PACS2Q86VP3 889 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 OSTM1Q86WC4 334 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 ARID3BQ8IVW6 561 aaPredicted RBP7.49□□□□□ -1.21
VPS50-218ENST00000485994 CCDC105Q8IYK2 499 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 CRYBG2Q8N1P7 616 aa7.49□□□□□ -1.21
VPS50-218ENST00000485994 TTC9BQ8N6N2 239 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms