RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 TAS1R1Q7RTX1 841 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 VPS36Q86VN1 386 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 DNAAF5Q86Y56 855 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 B3GALNT2Q8NCR0 500 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 OR10T2Q8NGX3 314 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 CLP1Q92989 425 aaKnown RBP12.01□□□□□ -0.49
SND1-212ENST00000485871 CYFIP2Q96F07 1278 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 ZNF558Q96NG5 402 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 SYT15Q9BQS2 421 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 ACBD6Q9BR61 282 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.01□□□□□ -0.49
SND1-212ENST00000485871 PACSIN1Q9BY11 444 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 TSGA10Q9BZW7 698 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 LACRTQ9GZZ8 138 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 CDH9Q9ULB4 789 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 INSL6Q9Y581 213 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 PCDHA13Q9Y5I0 950 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 SF3B1O75533 1304 aaKnown RBP eCLIP12.01□□□□□ -0.492e-6■■■■■ 105.7
SND1-212ENST00000485871 GREB1Q4ZG55 1949 aa12.01□□□□□ -0.49
SND1-212ENST00000485871 LCHNA4D1U4 455 aa12□□□□□ -0.49
SND1-212ENST00000485871 MED7O43513 233 aa12□□□□□ -0.49
SND1-212ENST00000485871 SSTR3P32745 418 aaPredicted RBP12□□□□□ -0.49
SND1-212ENST00000485871 MAGEA1P43355 309 aa12□□□□□ -0.49
SND1-212ENST00000485871 ALDH7A1P49419 539 aaKnown RBP12□□□□□ -0.49
SND1-212ENST00000485871 PSMC1P62191 440 aaKnown RBP12□□□□□ -0.49
SND1-212ENST00000485871 YWHAHQ04917 246 aaPredicted RBP12□□□□□ -0.49
SND1-212ENST00000485871 ELAVL2Q12926 359 aaKnown RBP12□□□□□ -0.49
SND1-212ENST00000485871 STILQ15468 1287 aa12□□□□□ -0.49
SND1-212ENST00000485871 SPA17Q15506 151 aa12□□□□□ -0.49
SND1-212ENST00000485871 INTS6LQ5JSJ4 861 aaKnown RBP12□□□□□ -0.49
SND1-212ENST00000485871 VARS2Q5ST30 1063 aaKnown RBP12□□□□□ -0.49
SND1-212ENST00000485871 CCDC122Q5T0U0 273 aa12□□□□□ -0.49
SND1-212ENST00000485871 C10orf76Q5T2E6 689 aa12□□□□□ -0.49
SND1-212ENST00000485871 FAM171A1Q5VUB5 890 aa12□□□□□ -0.49
SND1-212ENST00000485871 OVOS1Q6IE37 1185 aa12□□□□□ -0.49
SND1-212ENST00000485871 ACAD10Q6JQN1 1059 aa12□□□□□ -0.49
SND1-212ENST00000485871 TTC30AQ86WT1 665 aa12□□□□□ -0.49
SND1-212ENST00000485871 PASD1Q8IV76 773 aa12□□□□□ -0.49
SND1-212ENST00000485871 FUKQ8N0W3 1084 aa12□□□□□ -0.49
SND1-212ENST00000485871 TNIP3Q96KP6 325 aa12□□□□□ -0.49
SND1-212ENST00000485871 HEXIM2Q96MH2 286 aaKnown RBP12□□□□□ -0.49
SND1-212ENST00000485871 TMEM209Q96SK2 561 aa12□□□□□ -0.49
SND1-212ENST00000485871 RAD9AQ99638 391 aa12□□□□□ -0.49
SND1-212ENST00000485871 HNRNPABQ99729 332 aaKnown RBP12□□□□□ -0.49
SND1-212ENST00000485871 MTIF3Q9H2K0 278 aaKnown RBP12□□□□□ -0.49
SND1-212ENST00000485871 CHST7Q9NS84 486 aa12□□□□□ -0.49
SND1-212ENST00000485871 FAM49BQ9NUQ9 324 aa12□□□□□ -0.49
SND1-212ENST00000485871 TMLHEQ9NVH6 421 aa12□□□□□ -0.49
SND1-212ENST00000485871 PUF60Q9UHX1 559 aaKnown RBP12□□□□□ -0.49
SND1-212ENST00000485871 CYTH4Q9UIA0 394 aa12□□□□□ -0.49
SND1-212ENST00000485871 TSPAN16Q9UKR8 245 aa12□□□□□ -0.49
SND1-212ENST00000485871 INTUQ9ULD6 942 aa12□□□□□ -0.49
SND1-212ENST00000485871 MYBPHLA2RUH7 354 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 CARNS1A5YM72 827 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 KRT86O43790 486 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 RTN2O75298 545 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 ARHGEF15O94989 841 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 LSM8O95777 96 aaKnown RBP11.99□□□□□ -0.49
SND1-212ENST00000485871 CCDC130P13994 396 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 PCSK1P29120 753 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 GPD2P43304 727 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 GALCP54803 685 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 GOLGA7BQ2TAP0 167 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 RTP2Q5QGT7 225 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 NAA35Q5VZE5 725 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 MON1BQ7L1V2 547 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 LRRTM3Q86VH5 581 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 METTL23Q86XA0 190 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 PHF13Q86YI8 300 aaPredicted RBP11.99□□□□□ -0.49
SND1-212ENST00000485871 FIBCD1Q8N539 461 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 C1orf131Q8NDD1 294 aaKnown RBP11.99□□□□□ -0.49
SND1-212ENST00000485871 ANKRD7Q92527 254 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 B3GALT6Q96L58 329 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 HERC2P3Q9BVR0 1158 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 B3GNT5Q9BYG0 378 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 ZNF518BQ9C0D4 1074 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 ZCWPW1Q9H0M4 648 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 LUC7LQ9NQ29 371 aaKnown RBP11.99□□□□□ -0.49
SND1-212ENST00000485871 TRIM10Q9UDY6 481 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 SALL4Q9UJQ4 1053 aa11.99□□□□□ -0.49
SND1-212ENST00000485871 COL4A4P53420 1690 aaPredicted RBP11.99□□□□□ -0.49
SND1-212ENST00000485871 PLXNA3P51805 1871 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 NCANO14594 1321 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 TCRBV5S1A1TA0A578 114 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 LINC01553A4QN01 128 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 ANKRD62A6NC57 917 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 BTNL10A8MVZ5 291 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 TMCO5BA8MYB1 307 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 GABBR2O75899 941 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 FTLP02792 175 aaPredicted RBP11.98□□□□□ -0.49
SND1-212ENST00000485871 SOD2P04179 222 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 TMEM253P0C7T8 217 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 MMP8P22894 467 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 RPL34P49207 117 aaKnown RBP11.98□□□□□ -0.49
SND1-212ENST00000485871 PLCB3Q01970 1234 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 TCEAL1Q15170 157 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 PTPN20Q4JDL3 420 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 MDH1BQ5I0G3 518 aa11.98□□□□□ -0.49
SND1-212ENST00000485871 RSPO2Q6UXX9 243 aaPredicted RBP11.98□□□□□ -0.49
SND1-212ENST00000485871 THEM5Q8N1Q8 247 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms