RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 CSDE1O75534 798 aaKnown RBP7.4□□□□□ -1.22
SMC4-217ENST00000485867 KIF5BP33176 963 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 FNTBP49356 437 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 CCR3P51677 355 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 SATB1Q01826 763 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 DSG1Q02413 1049 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 PPP2R5DQ14738 602 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 IMMTQ16891 758 aaKnown RBP7.4□□□□□ -1.22
SMC4-217ENST00000485867 C20orf194Q5TEA3 1177 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 STPG1Q5TH74 334 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 TWF2Q6IBS0 349 aaKnown RBP7.4□□□□□ -1.22
SMC4-217ENST00000485867 SWSAP1Q6NVH7 229 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 EFCAB12Q6NXP0 572 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 LILRA6Q6PI73 481 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 GRASPQ7Z6J2 395 aaPredicted RBP7.4□□□□□ -1.22
SMC4-217ENST00000485867 CDH24Q86UP0 819 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 PALB2Q86YC2 1186 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 URGCPQ8TCY9 931 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 ZCCHC14Q8WYQ9 949 aaKnown RBP7.4□□□□□ -1.22
SMC4-217ENST00000485867 UBE2FQ969M7 185 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 RRP36Q96EU6 259 aaKnown RBP7.4□□□□□ -1.22
SMC4-217ENST00000485867 SCLT1Q96NL6 688 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 DPH2Q9BQC3 489 aaPredicted RBP7.4□□□□□ -1.22
SMC4-217ENST00000485867 LSM14BQ9BX40 385 aaKnown RBP7.4□□□□□ -1.22
SMC4-217ENST00000485867 LY9Q9HBG7 655 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 CHST12Q9NRB3 414 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 HEBP1Q9NRV9 189 aa7.4□□□□□ -1.22
SMC4-217ENST00000485867 NDRG2Q9UN36 371 aaKnown RBP7.4□□□□□ -1.22
SMC4-217ENST00000485867 VWA8A3KMH1 1905 aa7.4□□□□□ -1.23
SMC4-217ENST00000485867 NUP205Q92621 2012 aa7.4□□□□□ -1.23
SMC4-217ENST00000485867 NBEAQ8NFP9 2946 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 ASXL3Q9C0F0 2248 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 ZNF623O75123 536 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 ALDH2P05091 517 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 PGRP06401 933 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 TFE3P19532 575 aaPredicted RBP7.39□□□□□ -1.23
SMC4-217ENST00000485867 TMOD1P28289 359 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 CNR2P34972 360 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 RAB27AP51159 221 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 PDE1AP54750 535 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 CEP55Q53EZ4 464 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 LCE4AQ5TA78 99 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 MEI1Q5TIA1 1274 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 SLC6A19Q695T7 634 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 MIS18BP1Q6P0N0 1132 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 TRMT1LQ7Z2T5 733 aaKnown RBP7.39□□□□□ -1.23
SMC4-217ENST00000485867 ITFG1Q8TB96 612 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 DNASE1L2Q92874 299 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 TMEM87BQ96K49 555 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 MBOAT7Q96N66 472 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 ALPK1Q96QP1 1244 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 MIR1-1HGQ9H1L0 117 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 SEC63Q9UGP8 760 aaKnown RBP7.39□□□□□ -1.23
SMC4-217ENST00000485867 CEP131Q9UPN4 1083 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 PIN4Q9Y237 131 aaKnown RBP7.39□□□□□ -1.23
SMC4-217ENST00000485867 PRG3Q9Y2Y8 225 aaPredicted RBP7.39□□□□□ -1.23
SMC4-217ENST00000485867 WDFY3Q8IZQ1 3526 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 ATG2BQ96BY7 2078 aa7.39□□□□□ -1.23
SMC4-217ENST00000485867 ITPR1Q14643 2758 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 APC2O95996 2303 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 F8W810 466 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 MEIS1O00470 390 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 IFIT3O14879 490 aaKnown RBP7.38□□□□□ -1.23
SMC4-217ENST00000485867 ECI2O75521 394 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 TOP3BO95985 862 aaKnown RBP7.38□□□□□ -1.23
SMC4-217ENST00000485867 ZNF806P0C7X5 589 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 RPL17P18621 184 aaKnown RBP7.38□□□□□ -1.23
SMC4-217ENST00000485867 SDSP20132 328 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 CXCL12P48061 93 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 RBM25P49756 843 aaKnown RBP7.38□□□□□ -1.23
SMC4-217ENST00000485867 NOVA1P51513 510 aaKnown RBP7.38□□□□□ -1.23
SMC4-217ENST00000485867 CCDC6Q16204 474 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 SOWAHCQ53LP3 525 aaPredicted RBP7.38□□□□□ -1.23
SMC4-217ENST00000485867 CEP68Q76N32 757 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 LONP2Q86WA8 852 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 COLGALT2Q8IYK4 626 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 PIWIL2Q8TC59 973 aaKnown RBP7.38□□□□□ -1.23
SMC4-217ENST00000485867 PGBD1Q96JS3 809 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 FAM167AQ96KS9 214 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 B3GALT6Q96L58 329 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 FAM193BQ96PV7 902 aaPredicted RBP7.38□□□□□ -1.23
SMC4-217ENST00000485867 DSCC1Q9BVC3 393 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 PLA2G2FQ9BZM2 168 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 ARRDC1-AS1Q9H2J1 176 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 RSAD1Q9HA92 442 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.38□□□□□ -1.23
SMC4-217ENST00000485867 CHST7Q9NS84 486 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 FNIP2Q9P278 1114 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 FBXW11Q9UKB1 542 aa7.38□□□□□ -1.23
SMC4-217ENST00000485867 LOC400499M0QZD8 3231 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 CNTNAP2Q9UHC6 1331 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 ANKRD33BA6NCL7 494 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 K7ESF4 209 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 MAN2B1O00754 1011 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 EPN2O95208 641 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 PAPSS2O95340 614 aaPredicted RBP7.37□□□□□ -1.23
SMC4-217ENST00000485867 PLEKHA8P1O95397 391 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 TSPAN15O95858 294 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 POMCP01189 267 aa7.37□□□□□ -1.23
SMC4-217ENST00000485867 ESR1P03372 595 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms