RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	OBSL1	O75147	1896 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	CHAD	O15335	359 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	EXTL3	O43909	919 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	RPP40	O75818	363 aa	Known RBP	11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	PPP1R37	O75864	691 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	PRPF6	O94906	941 aa	Known RBP	11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	CYP11A1	P05108	521 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	GAP43	P17677	238 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	GABRR2	P28476	465 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	CTH	P32929	405 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	MPL	P40238	635 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	RAP1GAP	P47736	663 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	CYP4F8	P98187	520 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	SLC39A14	Q15043	492 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	PLA2G2C	Q5R387	149 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	L1TD1	Q5T7N2	865 aa	Known RBP	11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	PKN3	Q6P5Z2	889 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	CCDC73	Q6ZRK6	1079 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	GAREM2	Q75VX8	874 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	LRRTM3	Q86VH5	581 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	ARID3B	Q8IVW6	561 aa	Predicted RBP	11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	SYCP3	Q8IZU3	236 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	THEM5	Q8N1Q8	247 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	KDF1	Q8NAX2	398 aa	Predicted RBP	11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	GAB3	Q8WWW8	586 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	LOXL4	Q96JB6	756 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	ZFYVE19	Q96K21	471 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	STRA6	Q9BX79	667 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	GPR88	Q9GZN0	384 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	ZCWPW1	Q9H0M4	648 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	TRPV4	Q9HBA0	871 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	PANK4	Q9NVE7	773 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	GTSE1	Q9NYZ3	720 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	TFIP11	Q9UBB9	837 aa	Known RBP	11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	SEL1L	Q9UBV2	794 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	CEP192	Q8TEP8	1941 aa		11.4	□□□□□ -0.58
HMGN1-215	ENST00000485550	DSP	P15924	2871 aa	Known RBP	11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	PTPRD	P23468	1912 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	MYBPHL	A2RUH7	354 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	SRRM3	A6NNA2	597 aa	Predicted RBP	11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	KPNA7	A9QM74	516 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550		K7ELQ4	463 aa	Predicted RBP	11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	DPYSL4	O14531	572 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	STX6	O43752	255 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	ITGB3	P05106	788 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	POLR2B	P30876	1174 aa	Known RBP	11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	TUFM	P49411	452 aa	Known RBP	11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	ZNF252P-AS1	Q0IIN9	211 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	CCIN	Q13939	588 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	STK38	Q15208	465 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	TAF12	Q16514	161 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	GPR158	Q5T848	1215 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	STKLD1	Q8NE28	680 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	HPS3	Q969F9	1004 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	PSMG2	Q969U7	264 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	HVCN1	Q96D96	273 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	MSANTD3	Q96H12	275 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	INTS4	Q96HW7	963 aa	Known RBP	11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	LRRC3B	Q96PB8	259 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	CBWD1	Q9BRT8	395 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	EDEM2	Q9BV94	578 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	BACH2	Q9BYV9	841 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	ADAM33	Q9BZ11	813 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	POLR3B	Q9NW08	1133 aa	Predicted RBP	11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	ABI2	Q9NYB9	513 aa	Predicted RBP	11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	DSE	Q9UL01	958 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	AGAP1	Q9UPQ3	857 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	ASB3	Q9Y575	518 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	WDFY3	Q8IZQ1	3526 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	TCHH	Q07283	1943 aa		11.39	□□□□□ -0.59
HMGN1-215	ENST00000485550	C2orf72	A6NCS6	295 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	C4orf47	A7E2U8	309 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	IL18RAP	O95256	599 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	KRT19	P08727	400 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	ATF6	P18850	670 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	PAX3	P23760	479 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	HOXA6	P31267	233 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	GPR15	P49685	360 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	MLLT6	P55198	1093 aa	Predicted RBP	11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	SV2C	Q496J9	727 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	SDHAF4	Q5VUM1	108 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	C1orf228	Q6PIY5	440 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	ITIH5	Q86UX2	942 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	RALGPS2	Q86X27	583 aa	Predicted RBP	11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	BRSK2	Q8IWQ3	736 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	CSGALNACT2	Q8N6G5	542 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	C1orf127	Q8N9H9	656 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	GLIS3	Q8NEA6	775 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	PI4K2A	Q9BTU6	479 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	MKNK1	Q9BUB5	465 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	SMG9	Q9H0W8	520 aa	Known RBP	11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	PDE11A	Q9HCR9	933 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	TMLHE	Q9NVH6	421 aa		11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	RBAK	Q9NYW8	714 aa	Predicted RBP	11.38	□□□□□ -0.59
HMGN1-215	ENST00000485550	SPTLC2	O15270	562 aa		11.37	□□□□□ -0.59

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