RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 SOWAHAQ2M3V2 549 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 TSSK4Q6SA08 328 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 EPM2AIP1Q7L775 607 aaPredicted RBP12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 TRAPPC11Q7Z392 1133 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 MON1AQ86VX9 555 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 NELFCDQ8IXH7 590 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 SYNPOQ8N3V7 929 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 SPEM1Q8N4L4 309 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 GLIS3Q8NEA6 775 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 OR5B17Q8NGF7 314 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 CXorf38Q8TB03 319 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 TRMT2BQ96GJ1 504 aaKnown RBP12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 CEP295NLQ96MC4 621 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 SYT15Q9BQS2 421 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 SNX25Q9H3E2 840 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 TDP1Q9NUW8 608 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 GTSE1Q9NYZ3 720 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 PCDHA7Q9UN72 937 aa12.79□□□□□ -0.36
SNRNP200-206ENST00000484372 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 CLIC2O15247 247 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 EXOC3O60645 756 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 PHACTR2O75167 634 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 NOL4O94818 638 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 CLSTN1O94985 981 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 PRAMEF12O95522 483 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 FAM163BP0C2L3 166 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 HMGA1P17096 107 aaKnown RBP12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 MAGEA11P43364 429 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 AFMP43652 599 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 SOX9P48436 509 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 GPR15P49685 360 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 TNNC1P63316 161 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 ZNF268Q14587 947 aaPredicted RBP12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 PSMD6Q15008 389 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 KNOP1Q1ED39 458 aaKnown RBP12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 RESP18Q5W5W9 173 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 VSTM1Q6UX27 236 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 OSTM1Q86WC4 334 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 KIAA2013Q8IYS2 634 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 ZNF687Q8N1G0 1237 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 SUMF1Q8NBK3 374 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 TTC8Q8TAM2 541 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 SCFD1Q8WVM8 642 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 NELL1Q92832 810 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 CCDC127Q96BQ5 260 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 ZFYVE19Q96K21 471 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 MYRFLQ96LU7 910 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 CGRRF1Q99675 332 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 BLZF1Q9H2G9 400 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 SLC39A2Q9NP94 309 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 GKN1Q9NS71 199 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 CHMP5Q9NZZ3 219 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 GMEB2Q9UKD1 530 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 NCANO14594 1321 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 TICRRQ7Z2Z1 1910 aa12.78□□□□□ -0.36
SNRNP200-206ENST00000484372 COL4A3Q01955 1670 aa12.77□□□□□ -0.36
SNRNP200-206ENST00000484372 TRAV19A0A0A6YYK7 116 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 TRIM66O15016 1216 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 TGFB1I1O43294 461 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 LILRB5O75023 590 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 CKMP06732 381 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 USP17L7P0C7H9 530 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 WARSP23381 471 aaKnown RBP12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 HOXD13P35453 343 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 GNL1P36915 607 aaPredicted RBP12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 GRIK1P39086 918 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 AP3M2P53677 418 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 CYP27A1Q02318 531 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 DNM1Q05193 864 aaKnown RBP12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 CYP24A1Q07973 514 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 GRSF1Q12849 480 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 RUNX3Q13761 415 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 PON2Q15165 354 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 PDGFRLQ15198 375 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 BMT2Q1RMZ1 405 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 SDHAF4Q5VUM1 108 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 TXNDC8Q6A555 127 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 FAM171BQ6P995 826 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 ERMP1Q7Z2K6 904 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 C12orf56Q8IXR9 622 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 OR6B3Q8NGW1 331 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 CCDC47Q96A33 483 aaKnown RBP12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 SYAP1Q96A49 352 aaPredicted RBP12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 LRRC3BQ96PB8 259 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 SMG9Q9H0W8 520 aaKnown RBP12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 EPC1Q9H2F5 836 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 TRPC7Q9HCX4 862 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 EXOC1Q9NV70 894 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 USP25Q9UHP3 1055 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 RCOR1Q9UKL0 485 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 SMG5Q9UPR3 1016 aaKnown RBP12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 ATP6V1DQ9Y5K8 247 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 FANCMQ8IYD8 2048 aa12.77□□□□□ -0.37
SNRNP200-206ENST00000484372 PATJQ8NI35 1801 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 NUP210Q8TEM1 1887 aaPredicted RBP12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 ATG13O75143 517 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 TACC1O75410 805 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 KIF20AO95235 890 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 MYL1P05976 194 aa12.76□□□□□ -0.37
SNRNP200-206ENST00000484372 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms