RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ATICP31939 592 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
MSH5-216ENST00000484309 PLA2G5P39877 138 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 PIK3CAP42336 1068 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 GCLMP48507 274 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 AP3M2P53677 418 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 RPL10AP62906 217 aaKnown RBP13.12□□□□□ -0.31
MSH5-216ENST00000484309 PPP3CAQ08209 521 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 ORC1Q13415 861 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 NFIL3Q16649 462 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 ZACNQ401N2 412 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 ARHGAP15Q53QZ3 475 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 FAM171BQ6P995 826 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 C4orf50Q6ZRC1 276 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 SV2AQ7L0J3 742 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 GSDMAQ96QA5 445 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 GCNAQ96QF7 691 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 MKNK1Q9BUB5 465 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 FOXQ1Q9C009 403 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 SMG9Q9H0W8 520 aaKnown RBP13.12□□□□□ -0.31
MSH5-216ENST00000484309 SDCBP2Q9H190 292 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 CHMP5Q9NZZ3 219 aa13.12□□□□□ -0.31
MSH5-216ENST00000484309 MAGEC2Q9UBF1 373 aaPredicted RBP13.12□□□□□ -0.31
MSH5-216ENST00000484309 HOOK1Q9UJC3 728 aaKnown RBP13.12□□□□□ -0.31
MSH5-216ENST00000484309 F5P12259 2224 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 HEPACAM2A8MVW5 462 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 BIN1O00499 593 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 MAPK13O15264 365 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 LRRN2O75325 713 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 PRAMEF12O95522 483 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 CD72P21854 359 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 CDC25CP30307 473 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 GDI1P31150 447 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 PSMC2P35998 433 aaKnown RBP13.11□□□□□ -0.31
MSH5-216ENST00000484309 PMS1P54277 932 aaKnown RBP13.11□□□□□ -0.31
MSH5-216ENST00000484309 TCF15Q12870 199 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 MLF2Q15773 248 aaPredicted RBP13.11□□□□□ -0.31
MSH5-216ENST00000484309 EDRF1Q3B7T1 1238 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 CFAP221Q4G0U5 840 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 INTS8Q75QN2 995 aaKnown RBP13.11□□□□□ -0.31
MSH5-216ENST00000484309 TMEM150AQ86TG1 271 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 ARID3BQ8IVW6 561 aaPredicted RBP13.11□□□□□ -0.31
MSH5-216ENST00000484309 SPATA20Q8TB22 786 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 PCED1BQ96HM7 432 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 BRD9Q9H8M2 597 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 ABCB6Q9NP58 842 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 HEBP1Q9NRV9 189 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 MAN1B1Q9UKM7 699 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 CACNA1HO95180 2353 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 CACNA1IQ9P0X4 2223 aa13.11□□□□□ -0.31
MSH5-216ENST00000484309 WDFY4Q6ZS81 3184 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 CLDN5O00501 218 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 FGF19O95750 216 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 F11P03951 625 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 DCNP07585 359 aaKnown RBP13.1□□□□□ -0.31
MSH5-216ENST00000484309 CSH1P0DML2 217 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 CSH2P0DML3 217 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 CD44P16070 742 aaKnown RBP13.1□□□□□ -0.31
MSH5-216ENST00000484309 PSMC3P17980 439 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 PTPN1P18031 435 aaKnown RBP13.1□□□□□ -0.31
MSH5-216ENST00000484309 GRIK1P39086 918 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 CLCN5P51795 746 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 CACNA2D1P54289 1103 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 NLRP12P59046 1061 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 PFKPQ01813 784 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 SLC44A4Q53GD3 710 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 ANKRD40Q6AI12 368 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 KLHL10Q6JEL2 608 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 TPRG1Q6ZUI0 275 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 ADSSL1Q8N142 457 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 MAB21L3Q8N8X9 362 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 MYCBPAPQ8TBZ2 947 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 TAS1R2Q8TE23 839 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 FUBP3Q96I24 572 aaKnown RBP eCLIP13.1□□□□□ -0.31
MSH5-216ENST00000484309 TSG101Q99816 390 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 TRMT61BQ9BVS5 477 aaKnown RBP13.1□□□□□ -0.31
MSH5-216ENST00000484309 ZNF518BQ9C0D4 1074 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 GPR88Q9GZN0 384 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 TASP1Q9H6P5 420 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 VRTNQ9H8Y1 702 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 FAM86C1Q9NVL1 165 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 HMGXB4Q9UGU5 601 aa13.1□□□□□ -0.31
MSH5-216ENST00000484309 ATG2BQ96BY7 2078 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 F8VP50 259 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 H0Y858 1186 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 DPYSL4O14531 572 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 IKBKBO14920 756 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 CETN3O15182 167 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 GALR2O43603 387 aaPredicted RBP13.09□□□□□ -0.31
MSH5-216ENST00000484309 TADA3O75528 432 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 NOL4O94818 638 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 ASS1P00966 412 aaKnown RBP13.09□□□□□ -0.31
MSH5-216ENST00000484309 EPB41P11171 864 aaKnown RBP13.09□□□□□ -0.31
MSH5-216ENST00000484309 ANXA13P27216 316 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 MAGEA11P43364 429 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 ASPAP45381 313 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 NHLH1Q02575 133 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 IFRD2Q12894 506 aaPredicted RBP13.09□□□□□ -0.31
MSH5-216ENST00000484309 UBXN2BQ14CS0 331 aa13.09□□□□□ -0.31
MSH5-216ENST00000484309 MAPRE1Q15691 268 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms