RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 KRT16P08779 473 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 WEE2P0C1S8 567 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 CA4P22748 312 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 CCND1P24385 295 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 EDNRBP24530 442 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 ALDH3A1P30838 453 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 MSH2P43246 934 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 CTCFP49711 727 aaPredicted RBP20.68■□□□□ 0.9
LIMS2-215ENST00000484252 LACTBP83111 547 aaPredicted RBP20.68■□□□□ 0.9
LIMS2-215ENST00000484252 DNAJC3Q13217 504 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 SH3D19Q5HYK7 790 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 DENND1BQ6P3S1 775 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 POTEAQ6S8J7 498 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 TBC1D31Q96DN5 1066 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 KLRG1Q96E93 195 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 FAXDC2Q96IV6 333 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 XYLT2Q9H1B5 865 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 AFG3L2Q9Y4W6 797 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 B4GALT4O60513 344 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 HOXC6P09630 235 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 RPA3P35244 121 aaPredicted RBP20.68■□□□□ 0.9
LIMS2-215ENST00000484252 RFC1P35251 1148 aaPredicted RBP20.68■□□□□ 0.9
LIMS2-215ENST00000484252 TFAMQ00059 246 aaKnown RBP20.68■□□□□ 0.9
LIMS2-215ENST00000484252 OTUD4Q01804 1114 aaKnown RBP20.68■□□□□ 0.9
LIMS2-215ENST00000484252 LAMTOR4Q0VGL1 99 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 MOGSQ13724 837 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 KLHL38Q2WGJ6 581 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 HP1BP3Q5SSJ5 553 aaPredicted RBP20.68■□□□□ 0.9
LIMS2-215ENST00000484252 HHATQ5VTY9 493 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 ACTL9Q8TC94 416 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 PYROXD1Q8WU10 500 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 ANKRD36BP1Q96IX9 119 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 RABGEF1Q9UJ41 708 aa20.68■□□□□ 0.9
LIMS2-215ENST00000484252 ZMYND8Q9ULU4 1186 aaPredicted RBP20.68■□□□□ 0.9
LIMS2-215ENST00000484252 NFKBIEO00221 500 aa20.67■□□□□ 0.9
LIMS2-215ENST00000484252 KIF3CO14782 793 aa20.67■□□□□ 0.9
LIMS2-215ENST00000484252 GBP2P32456 591 aaPredicted RBP20.67■□□□□ 0.9
LIMS2-215ENST00000484252 TCF7P36402 384 aaPredicted RBP20.67■□□□□ 0.9
LIMS2-215ENST00000484252 GPX6P59796 221 aa20.67■□□□□ 0.9
LIMS2-215ENST00000484252 PTPN20Q4JDL3 420 aa20.67■□□□□ 0.9
LIMS2-215ENST00000484252 MPZL3Q6UWV2 235 aa20.67■□□□□ 0.9
LIMS2-215ENST00000484252 METTL7BQ6UX53 244 aa20.67■□□□□ 0.9
LIMS2-215ENST00000484252 C4orf33Q8N1A6 199 aa20.67■□□□□ 0.9
LIMS2-215ENST00000484252 NAT8LQ8N9F0 302 aa20.67■□□□□ 0.9
LIMS2-215ENST00000484252 ANKLE1Q8NAG6 615 aa20.67■□□□□ 0.9
LIMS2-215ENST00000484252 RSAD2Q8WXG1 361 aa20.67■□□□□ 0.9
LIMS2-215ENST00000484252 L3MBTL3Q96JM7 780 aaPredicted RBP20.67■□□□□ 0.9
LIMS2-215ENST00000484252 KIF9Q9HAQ2 790 aa20.67■□□□□ 0.9
LIMS2-215ENST00000484252 CLUHO75153 1309 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 E7ESA3 106 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 CST8O60676 142 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 LRCH4O75427 683 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 WFS1O76024 890 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 PROZP22891 400 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 KDELR1P24390 212 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 SPDYAQ5MJ70 313 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 SCARA5Q6ZMJ2 495 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 TSHZ1Q6ZSZ6 1077 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 KIF2BQ8N4N8 673 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 AGAP11Q8TF27 550 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 CPT1BQ92523 772 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 ZWILCHQ9H900 591 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 GOLGA8SH3BPF8 625 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 SRGAP2CP0DJJ0 459 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 PSMC1P62191 440 aaKnown RBP20.66■□□□□ 0.9
LIMS2-215ENST00000484252 ATP11AP98196 1134 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 ACAP1Q15027 740 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 PARP6Q2NL67 630 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 CAPN12Q6ZSI9 719 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 ANKMY2Q8IV38 441 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 RNF149Q8NC42 400 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 ALKBH8Q96BT7 664 aaKnown RBP20.66■□□□□ 0.9
LIMS2-215ENST00000484252 LRRC37BQ96QE4 947 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 DHRS4Q9BTZ2 278 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 MYLK2Q9H1R3 596 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 ACSS3Q9H6R3 686 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 NOP53Q9NZM5 478 aaKnown RBP20.66■□□□□ 0.9
LIMS2-215ENST00000484252 GJA3Q9Y6H8 435 aa20.66■□□□□ 0.9
LIMS2-215ENST00000484252 CD19P15391 556 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 DYNLT1P63172 113 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 MYO1EQ12965 1108 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 SLC1A5Q15758 541 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 ANGEL2Q5VTE6 544 aaKnown RBP20.65■□□□□ 0.9
LIMS2-215ENST00000484252 TLDC1Q6P9B6 456 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 ADGRD1Q6QNK2 874 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 LBX2Q6XYB7 198 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 DEFB132Q7Z7B7 95 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 VSIG1Q86XK7 387 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 RIOX2Q8IUF8 465 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 LRMDAQ9H2I8 198 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 GRID1Q9ULK0 1009 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 IGKV6-21A0A0C4DH24 114 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 RPL22P35268 128 aaKnown RBP20.65■□□□□ 0.9
LIMS2-215ENST00000484252 AGGF1Q8N302 714 aaeCLIP20.65■□□□□ 0.9
LIMS2-215ENST00000484252 ARFGAP1Q8N6T3 406 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 JOSD2Q8TAC2 188 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 ZNF398Q8TD17 642 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 MAK16Q9BXY0 300 aaKnown RBP20.65■□□□□ 0.9
LIMS2-215ENST00000484252 BCO2Q9BYV7 579 aa20.65■□□□□ 0.9
LIMS2-215ENST00000484252 ETNK1Q9HBU6 452 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms