RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 HTTP42858 3142 aa27.71■■■□□ 2.03
SHOX2-204ENST00000483851 C9IYK1 514 aa27.7■■■□□ 2.03
SHOX2-204ENST00000483851 PITPNM1O00562 1244 aa27.7■■■□□ 2.03
SHOX2-204ENST00000483851 GABRDO14764 452 aa27.7■■■□□ 2.03
SHOX2-204ENST00000483851 COL6A1P12109 1028 aa27.7■■■□□ 2.03
SHOX2-204ENST00000483851 AARSP49588 968 aaKnown RBP eCLIP27.7■■■□□ 2.034e-6■■■■□ 24
SHOX2-204ENST00000483851 RNASE9P60153 205 aaKnown RBP27.7■■■□□ 2.03
SHOX2-204ENST00000483851 FAM189BP81408 668 aa27.7■■■□□ 2.03
SHOX2-204ENST00000483851 DEFB118Q96PH6 123 aa27.7■■■□□ 2.03
SHOX2-204ENST00000483851 LRRC1Q9BTT6 524 aa27.7■■■□□ 2.03
SHOX2-204ENST00000483851 FGFR1P11362 822 aa27.7■■■□□ 2.02
SHOX2-204ENST00000483851 KRT3P12035 628 aa27.7■■■□□ 2.02
SHOX2-204ENST00000483851 MARCKSL1P49006 195 aa27.7■■■□□ 2.02
SHOX2-204ENST00000483851 RPL7AP62424 266 aaKnown RBP27.7■■■□□ 2.02
SHOX2-204ENST00000483851 UPP1Q16831 310 aa27.7■■■□□ 2.02
SHOX2-204ENST00000483851 MAP9Q49MG5 647 aa27.7■■■□□ 2.02
SHOX2-204ENST00000483851 LRRC38Q5VT99 294 aa27.7■■■□□ 2.02
SHOX2-204ENST00000483851 MCEEQ96PE7 176 aa27.7■■■□□ 2.02
SHOX2-204ENST00000483851 CYLDQ9NQC7 956 aa27.7■■■□□ 2.02
SHOX2-204ENST00000483851 WBP1LQ9NX94 342 aa27.7■■■□□ 2.02
SHOX2-204ENST00000483851 TDRD15B5MCY1 1934 aaKnown RBP27.69■■■□□ 2.02
SHOX2-204ENST00000483851 GOLGA6L10A0A0M3HER8 536 aa27.69■■■□□ 2.02
SHOX2-204ENST00000483851 PFKMP08237 780 aa27.69■■■□□ 2.02
SHOX2-204ENST00000483851 CCL5P13501 91 aa27.69■■■□□ 2.02
SHOX2-204ENST00000483851 CYP4A22Q5TCH4 519 aa27.69■■■□□ 2.02
SHOX2-204ENST00000483851 UBA3Q8TBC4 463 aa27.69■■■□□ 2.02
SHOX2-204ENST00000483851 SLITRK6Q9H5Y7 841 aa27.69■■■□□ 2.02
SHOX2-204ENST00000483851 ERBB2P04626 1255 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 MYBL2P10244 700 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 LHX1P48742 406 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 CLCNKBP51801 687 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 AFF1P51825 1210 aaKnown RBP27.68■■■□□ 2.02
SHOX2-204ENST00000483851 TUSC3Q13454 348 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 ANKRD52Q8NB46 1076 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 SLC35F5Q8WV83 523 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 SENP8Q96LD8 212 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 SLC4A5Q9BY07 1137 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 RNF208Q9H0X6 261 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 ACAP1Q15027 740 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 ZDHHC17Q8IUH5 632 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 RNF169Q8NCN4 708 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 HDAC7Q8WUI4 952 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 STIM2Q9P246 746 aa27.68■■■□□ 2.02
SHOX2-204ENST00000483851 DMGDHQ9UI17 866 aaKnown RBP27.68■■■□□ 2.02
SHOX2-204ENST00000483851 PCNTO95613 3336 aa27.67■■■□□ 2.02
SHOX2-204ENST00000483851 ZMYND10O75800 440 aa27.67■■■□□ 2.02
SHOX2-204ENST00000483851 PYGMP11217 842 aa27.67■■■□□ 2.02
SHOX2-204ENST00000483851 BCAT1P54687 386 aa27.67■■■□□ 2.02
SHOX2-204ENST00000483851 MTFR1Q15390 333 aa27.67■■■□□ 2.02
SHOX2-204ENST00000483851 TMEM110Q86TL2 294 aa27.67■■■□□ 2.02
SHOX2-204ENST00000483851 RTN4RL1Q86UN2 441 aaPredicted RBP27.67■■■□□ 2.02
SHOX2-204ENST00000483851 TTC30AQ86WT1 665 aa27.67■■■□□ 2.02
SHOX2-204ENST00000483851 KRT12Q99456 494 aa27.67■■■□□ 2.02
SHOX2-204ENST00000483851 CENPFP49454 3210 aa27.67■■■□□ 2.02
SHOX2-204ENST00000483851 LMO2P25791 158 aa27.66■■■□□ 2.02
SHOX2-204ENST00000483851 BST2Q10589 180 aaKnown RBP27.66■■■□□ 2.02
SHOX2-204ENST00000483851 ZNF211Q13398 564 aaPredicted RBP27.66■■■□□ 2.02
SHOX2-204ENST00000483851 CPNE8Q86YQ8 564 aa27.66■■■□□ 2.02
SHOX2-204ENST00000483851 KATNAL2Q8IYT4 538 aa27.66■■■□□ 2.02
SHOX2-204ENST00000483851 B3GALNT2Q8NCR0 500 aa27.66■■■□□ 2.02
SHOX2-204ENST00000483851 AENQ8WTP8 325 aaKnown RBP27.66■■■□□ 2.02
SHOX2-204ENST00000483851 MAIP1Q8WWC4 291 aa27.66■■■□□ 2.02
SHOX2-204ENST00000483851 DPEP3Q9H4B8 488 aa27.66■■■□□ 2.02
SHOX2-204ENST00000483851 FAM49BQ9NUQ9 324 aa27.66■■■□□ 2.02
SHOX2-204ENST00000483851 ARHGEF37A1IGU5 675 aa27.66■■■□□ 2.02
SHOX2-204ENST00000483851 POLR3GO15318 223 aaPredicted RBP27.66■■■□□ 2.02
SHOX2-204ENST00000483851 PDGFRBP09619 1106 aa27.66■■■□□ 2.02
SHOX2-204ENST00000483851 RPL34P49207 117 aaKnown RBP27.66■■■□□ 2.02
SHOX2-204ENST00000483851 GLB1LQ6UWU2 654 aa27.66■■■□□ 2.02
SHOX2-204ENST00000483851 HNRNPABQ99729 332 aaKnown RBP27.66■■■□□ 2.02
SHOX2-204ENST00000483851 TNFRSF8P28908 595 aa27.65■■■□□ 2.02
SHOX2-204ENST00000483851 RFC1P35251 1148 aaPredicted RBP27.65■■■□□ 2.02
SHOX2-204ENST00000483851 ZNF252P-AS1Q0IIN9 211 aa27.65■■■□□ 2.02
SHOX2-204ENST00000483851 WSCD1Q658N2 575 aa27.65■■■□□ 2.02
SHOX2-204ENST00000483851 DSTYKQ6XUX3 929 aa27.65■■■□□ 2.02
SHOX2-204ENST00000483851 SLC13A5Q86YT5 568 aaPredicted RBP27.65■■■□□ 2.02
SHOX2-204ENST00000483851 CCDC26Q8TAB7 109 aa27.65■■■□□ 2.02
SHOX2-204ENST00000483851 AP1M1Q9BXS5 423 aa27.65■■■□□ 2.02
SHOX2-204ENST00000483851 ELAC1Q9H777 363 aaKnown RBP27.65■■■□□ 2.02
SHOX2-204ENST00000483851 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.65■■■□□ 2.02
SHOX2-204ENST00000483851 KANSL3Q9P2N6 904 aa27.65■■■□□ 2.02
SHOX2-204ENST00000483851 MTUS1Q9ULD2 1270 aa27.65■■■□□ 2.02
SHOX2-204ENST00000483851 GOLGA8SH3BPF8 625 aa27.64■■■□□ 2.02
SHOX2-204ENST00000483851 GJB6O95452 261 aa27.64■■■□□ 2.02
SHOX2-204ENST00000483851 PARNO95453 639 aaKnown RBP27.64■■■□□ 2.02
SHOX2-204ENST00000483851 MAATS1Q7Z4T9 603 aa27.64■■■□□ 2.02
SHOX2-204ENST00000483851 OSTM1Q86WC4 334 aa27.64■■■□□ 2.02
SHOX2-204ENST00000483851 EXD1Q8NHP7 514 aa27.64■■■□□ 2.02
SHOX2-204ENST00000483851 APBB2Q92870 758 aa27.64■■■□□ 2.02
SHOX2-204ENST00000483851 TJP2Q9UDY2 1190 aa27.64■■■□□ 2.02
SHOX2-204ENST00000483851 DSEQ9UL01 958 aa27.64■■■□□ 2.02
SHOX2-204ENST00000483851 SART1O43290 800 aaKnown RBP27.64■■■□□ 2.01
SHOX2-204ENST00000483851 POMCP01189 267 aa27.64■■■□□ 2.01
SHOX2-204ENST00000483851 SCNN1AP37088 669 aa27.64■■■□□ 2.01
SHOX2-204ENST00000483851 ACADSBP45954 432 aa27.64■■■□□ 2.01
SHOX2-204ENST00000483851 GPS2Q13227 327 aa27.64■■■□□ 2.01
SHOX2-204ENST00000483851 HSFY1Q96LI6 401 aa27.64■■■□□ 2.01
SHOX2-204ENST00000483851 CASTOR2A6NHX0 329 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 FSCN2O14926 492 aa27.63■■■□□ 2.01
SHOX2-204ENST00000483851 PTPN1P18031 435 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms